RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 PIGUQ9H490 435 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 RUBCNLQ9H714 662 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 TRIM45Q9H8W5 580 aaPredicted RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 DUSP22Q9NRW4 184 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 SEC14L3Q9UDX4 400 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 ATXN7L1Q9ULK2 861 aaPredicted RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 SATB2Q9UPW6 733 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 SAMHD1Q9Y3Z3 626 aaKnown RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 ENPP4Q9Y6X5 453 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 CABIN1Q9Y6J0 2220 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 IGHV5-10-1A0A0J9YXX1 117 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 A0A1B0GX78 115 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 SYNDIG1LA6NDD5 238 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 H0YAE9 185 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 CASC3O15234 703 aaKnown RBP16■□□□□ 0.15
HDDC3-206ENST00000561036 DNAJB5O75953 348 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 H6PDO95479 791 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 AK1P00568 194 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 IFNW1P05000 195 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 FESP07332 822 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 ALOX5P09917 674 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 RHCEP18577 417 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 XCR1P46094 333 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 IST1P53990 364 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 DUSP7Q16829 419 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 ARHGAP11BQ3KRB8 267 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 DBX2Q6ZNG2 339 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 TSEN54Q7Z6J9 526 aaKnown RBP16■□□□□ 0.15
HDDC3-206ENST00000561036 CARM1Q86X55 608 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 GALNT12Q8IXK2 581 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 DHRSXQ8N5I4 330 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 SMYD1Q8NB12 490 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 CHDHQ8NE62 594 aaPredicted RBP16■□□□□ 0.15
HDDC3-206ENST00000561036 PMM1Q92871 262 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 RIT1Q92963 219 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 FKBP10Q96AY3 582 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 DGAT2Q96PD7 388 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 ADI1Q9BV57 179 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 PINK1Q9BXM7 581 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 ALOXE3Q9BYJ1 711 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 ARRDC1-AS1Q9H2J1 176 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 ANKRA2Q9H9E1 313 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 VNN3Q9NY84 501 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 NDOR1Q9UHB4 597 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 FAM32AQ9Y421 112 aaKnown RBP16■□□□□ 0.15
HDDC3-206ENST00000561036 TMEM184BQ9Y519 407 aaPredicted RBP16■□□□□ 0.15
HDDC3-206ENST00000561036 CLDN16Q9Y5I7 305 aa16■□□□□ 0.15
HDDC3-206ENST00000561036 SDK1Q7Z5N4 2213 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 DSPPQ9NZW4 1301 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 TTC36A6NLP5 189 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 SYT5O00445 386 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 GUSBP08236 651 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 THRBP10828 461 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 ACP2P11117 423 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 FBLP22087 321 aaKnown RBP15.99■□□□□ 0.15
HDDC3-206ENST00000561036 ALAS2P22557 587 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 CAPGP40121 348 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 MAP3K8P41279 467 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 GRK6P43250 576 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 HPCAP84074 193 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 TRA2AQ13595 282 aaKnown RBP eCLIP15.99■□□□□ 0.15
HDDC3-206ENST00000561036 SYT16Q17RD7 645 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 SLC36A3Q495N2 470 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 AP1ARQ63HQ0 302 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 ZC3H14Q6PJT7 736 aaKnown RBP15.99■□□□□ 0.15
HDDC3-206ENST00000561036 UGT2A3Q6UWM9 527 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 TMPRSS9Q7Z410 1059 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 TMEM179BQ7Z7N9 219 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 BPHLQ86WA6 291 aaPredicted RBP15.99■□□□□ 0.15
HDDC3-206ENST00000561036 SHISA5Q8N114 240 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 SLC16A11Q8NCK7 471 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 GPR32P1Q8NGA4 272 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 PIP5K1AQ99755 562 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 RBCK1Q9BYM8 510 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 SLC38A1Q9H2H9 487 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 MTHFD2LQ9H903 347 aaPredicted RBP15.99■□□□□ 0.15
HDDC3-206ENST00000561036 ZNF304Q9HCX3 659 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 ADAP2Q9NPF8 381 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 LANCL2Q9NS86 450 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 SH3GLB1Q9Y371 365 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 ORC6Q9Y5N6 252 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 KCNE3Q9Y6H6 103 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 ADAMTS9Q9P2N4 1935 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 COL6A3P12111 3177 aa15.99■□□□□ 0.15
HDDC3-206ENST00000561036 TGFBR3LH3BV60 316 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 NTN3O00634 580 aaPredicted RBP15.98■□□□□ 0.15
HDDC3-206ENST00000561036 GALR2O43603 387 aaPredicted RBP15.98■□□□□ 0.15
HDDC3-206ENST00000561036 CBX7O95931 251 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 ALBP02768 609 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 CT62P0C5K7 136 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 S1PR1P21453 382 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 MYF6P23409 242 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 OR1E2P47887 323 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 CHN2P52757 468 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 HMGA2P52926 109 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 RAD23AP54725 363 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 LPAL2Q16609 132 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 DUSP5Q16690 384 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 PLA2G2CQ5R387 149 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 RHBDD2Q6NTF9 364 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms