RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 KCND3Q9UK17 655 aa8.11□□□□□ -1.11
CCDC33-209ENST00000560565 UTS2RQ9UKP6 389 aa8.11□□□□□ -1.11
CCDC33-209ENST00000560565 DLGAP4Q9Y2H0 992 aa8.11□□□□□ -1.11
CCDC33-209ENST00000560565 TMA7Q9Y2S6 64 aaKnown RBP8.11□□□□□ -1.11
CCDC33-209ENST00000560565 LSM2Q9Y333 95 aaKnown RBP8.11□□□□□ -1.11
CCDC33-209ENST00000560565 PCDHB9Q9Y5E1 797 aa8.11□□□□□ -1.11
CCDC33-209ENST00000560565 PCDHGC4Q9Y5F7 938 aa8.11□□□□□ -1.11
CCDC33-209ENST00000560565 CROCCQ5TZA2 2017 aa8.11□□□□□ -1.11
CCDC33-209ENST00000560565 ZFC3H1O60293 1989 aaKnown RBP8.11□□□□□ -1.11
CCDC33-209ENST00000560565 ABCA7Q8IZY2 2146 aa8.11□□□□□ -1.11
CCDC33-209ENST00000560565 TEP1Q99973 2627 aaKnown RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 EDDM13A0A1B0GTR0 161 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 A0A1W2PQL4 384 aaPredicted RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 C1orf226A1L170 272 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 BTN3A3O00478 584 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 AKAP8O43823 692 aaKnown RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 LZTS3O60299 673 aaPredicted RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 TPST2O60704 377 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 MTRF1O75570 445 aaKnown RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 GPX5O75715 221 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 TSPAN9O75954 239 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CDRT1O95170 752 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 PRNPP04156 253 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 IFNA16P05015 189 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CSF3P09919 207 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 PIRTP0C851 137 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CYP2A6P11509 494 aaPredicted RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 PSKH1P11801 424 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 ANXA3P12429 323 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 IL32P24001 234 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 STOMP27105 288 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CNR2P34972 360 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 PTGS2P35354 604 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CHI3L1P36222 383 aaPredicted RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 RPS19P39019 145 aaKnown RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CDKN2CP42773 168 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CRATP43155 626 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CTSOP43234 321 aaPredicted RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CRYBB2P43320 205 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 LIMS1P48059 325 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 STK19P49842 368 aaPredicted RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 SMSP52788 366 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 EPHA4P54764 986 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CYP4F2P78329 520 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 PITPNAQ00169 270 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CDK6Q00534 326 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CD83Q01151 205 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 ACSM1Q08AH1 577 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 DMWDQ09019 674 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 ZNF763Q0D2J5 394 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 MESP2Q0VG99 397 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CNTN1Q12860 1018 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 TPBGQ13641 420 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 UGT8Q16880 541 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 BTBD16Q32M84 506 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 FBXO48Q5FWF7 155 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CD276Q5ZPR3 534 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 SAXO2Q658L1 398 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 TMEM215Q68D42 235 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 C12orf73Q69YU5 71 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 LAIR1Q6GTX8 287 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 FAM122CQ6P4D5 195 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 KLHL17Q6TDP4 642 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 GDPD4Q6W3E5 623 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 RFPL4BQ6ZWI9 263 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 USP30Q70CQ3 517 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 FAM124AQ86V42 546 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 ANKRD46Q86W74 232 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 SFTPA1Q8IWL2 248 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CADM2Q8N3J6 435 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 Q8N402 240 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 FAM26EQ8N5C1 309 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 YIPF7Q8N8F6 280 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 LSMEM1Q8N8F7 131 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 SUMF1Q8NBK3 374 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 AQP11Q8NBQ7 271 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 TMIEQ8NEW7 156 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 ANKK1Q8NFD2 765 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 OR2A12Q8NGT7 310 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CLHC1Q8NHS4 586 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 ESAMQ96AP7 390 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 OMA1Q96E52 524 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 OTUB1Q96FW1 271 aaPredicted RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 ZNF578Q96N58 590 aaPredicted RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 FOPNLQ96NB1 174 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CAMK1GQ96NX5 476 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 OR2M2Q96R28 347 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 HBEGFQ99075 208 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 ACAT2Q9BWD1 397 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 NLNQ9BYT8 704 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 BTBD1Q9H0C5 482 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 C11orf54Q9H0W9 315 aaPredicted RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 MED28Q9H204 178 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 REEP4Q9H6H4 257 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 HHATLQ9HCP6 504 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 NEUROD4Q9HD90 331 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 ASB6Q9NWX5 421 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 NFKBIL1Q9UBC1 381 aaPredicted RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 NUFIP1Q9UHK0 495 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms