RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CLEC12BQ2HXU8 276 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 TMEM81Q6P7N7 255 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 VWA1Q6PCB0 445 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 BTLAQ7Z6A9 289 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 MYLK4Q86YV6 388 aaPredicted RBP16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 SPATA6LQ8N4H0 392 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 MAPK1IP1LQ8NDC0 245 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 EXT2Q93063 718 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 KCNF1Q9H3M0 494 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 GALNT9Q9HCQ5 603 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 ZNF701Q9NV72 531 aaPredicted RBP16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 RNF112Q9ULX5 631 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 CFL2Q9Y281 166 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 SLC22A20A6NK97 555 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 WASHC1A8K0Z3 465 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 PLPP1O14494 284 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 NT5EP21589 574 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 PAFAH1B1P43034 410 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 LHX2P50458 406 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 SIRPAP78324 504 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 KRTAP1-1Q07627 177 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 FUT7Q11130 342 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 NNATQ16517 81 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 BEX5Q5H9J7 111 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 C10orf62Q5T681 223 aaPredicted RBP16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 OR52E8Q6IFG1 317 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 ZNF474Q6S9Z5 364 aaPredicted RBP16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 ZNF615Q8N8J6 731 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 PDPRQ8NCN5 879 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 OR7G1Q8NGA0 311 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 HUS1BQ8NHY5 278 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 CAVIN3Q969G5 261 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 CTHRC1Q96CG8 243 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 ZNF845Q96IR2 970 aaPredicted RBP16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 NODALQ96S42 347 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 G6PC3Q9BUM1 346 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 CD244Q9BZW8 370 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 KLHL4Q9C0H6 718 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 NXF5Q9H1B4 397 aaKnown RBP16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 YAE1D1Q9NRH1 226 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 NSMCE4AQ9NXX6 385 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 DKKL1Q9UK85 242 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 ABCA1O95477 2261 aa16.13■□□□□ 0.17
TSPAN3-208ENST00000560514 A0A1W2PR48 441 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 PRAMEF25A6NGN4 478 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 E7ESA3 106 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 HCRTR2O43614 444 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 SEC31AO94979 1220 aaKnown RBP16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 FAM58BPP0C7Q3 252 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 CCDC166P0CW27 439 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 ZNF708P17019 499 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 EPORP19235 508 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 PTX3P26022 381 aaPredicted RBP16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 SRD5A2P31213 254 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 PIK3CBP42338 1070 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 ARFIP1P53367 373 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 GFRA1P56159 465 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 ATP6V0D1P61421 351 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 GNG11P61952 73 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 POU4F1Q01851 419 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 PLCXD2Q0VAA5 305 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 FGFBP1Q14512 234 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 CHRFAM7AQ494W8 412 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 ZNF704Q6ZNC4 412 aaPredicted RBP16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 HIPK1Q86Z02 1210 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 KLHL7Q8IXQ5 586 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 RNF175Q8N4F7 328 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 OMA1Q96E52 524 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 TSPAN17Q96FV3 270 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 MTERF1Q99551 399 aaKnown RBP16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 RHOJQ9H4E5 214 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 OPTCQ9UBM4 332 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 ASB4Q9Y574 426 aa16.12■□□□□ 0.17
TSPAN3-208ENST00000560514 HAX1O00165 279 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 ABCB7O75027 752 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 AIFM1O95831 613 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 CT62P0C5K7 136 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 GPX3P22352 226 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 CNTFP26441 200 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 CCKARP32238 428 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 CLDN18P56856 261 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 E2F2Q14209 437 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 ETFDHQ16134 617 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 ANKRD34AQ69YU3 496 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 GRHL2Q6ISB3 625 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 CYS1Q717R9 158 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 PLCZ1Q86YW0 608 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 OR4K14Q8NGD5 310 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 HGDQ93099 445 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 REPS1Q96D71 796 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 TMCO6Q96DC7 493 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 TRMT61AQ96FX7 289 aaKnown RBP16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 MARK4Q96L34 752 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 NAPGQ99747 312 aaPredicted RBP16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 BCAP29Q9UHQ4 241 aa16.11■□□□□ 0.17
TSPAN3-208ENST00000560514 A0A0A6YYD5 115 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 LRRC14BA6NHZ5 514 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 ACOX3O15254 700 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 TP73O15350 636 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms