RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TRILQ7L0X0 811 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 UBE3DQ7Z6J8 389 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 SLC15A4Q8N697 577 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 ZNF721Q8TF20 911 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 ESAMQ96AP7 390 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 SLC7A6OSQ96CW6 309 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-214ENST00000560402 MAPKAP1Q9BPZ7 522 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 LIN28AQ9H9Z2 209 aaKnown RBP12.53□□□□□ -0.4
SMAD3-214ENST00000560402 NPDC1Q9NQX5 325 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-214ENST00000560402 KCNN3Q9UGI6 736 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 ITGB1BP2Q9UKP3 347 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 FIS1Q9Y3D6 152 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 TSC22D4Q9Y3Q8 395 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 ATG4BQ9Y4P1 393 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 HRH3Q9Y5N1 445 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 MED13LQ71F56 2210 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 A0A0G2JMM0 328 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 A0A1W2PPB8 328 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 A0A1W2PRS3 328 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 KIR3DP1A8MWS1 328 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 NPIPA2E9PIF3 369 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 NPIPA3F8WFD2 350 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 HCN1O60741 890 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 TOXO94900 526 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 KRT16P08779 473 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 HOXD4P09016 255 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 PCNAP12004 261 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 MTHFD2P13995 350 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 EPHA3P29320 983 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 ARL1P40616 181 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 BUD31P41223 144 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 PIK3CBP42338 1070 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 MAN2A2P49641 1150 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 RAP1GDS1P52306 607 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 PHEXP78562 749 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 TNFRSF17Q02223 184 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 KLF10Q13118 480 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 PCBP2Q15366 365 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 TESK1Q15569 626 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 LSM12Q3MHD2 195 aaKnown RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 GXYLT1Q4G148 440 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 PIGGQ5H8A4 983 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 DEPDC1Q5TB30 811 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 B3GNT6Q6ZMB0 384 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 GPRIN3Q6ZVF9 776 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 DMRTC2Q8IXT2 367 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 ZCCHC7Q8N3Z6 543 aaKnown RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 TMEM251Q8N6I4 163 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF321PQ8N8H1 164 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 OR7G3Q8NG95 312 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 RP9Q8TA86 221 aaKnown RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 TRPC4APQ8TEL6 797 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF483Q8TF39 744 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 ATP6V1E2Q96A05 226 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 ANKRD9Q96BM1 317 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 SARAFQ96BY9 339 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 FBXL20Q96IG2 436 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 MAELQ96JY0 434 aaKnown RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 RPF2Q9H7B2 306 aaKnown RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 PNPLA3Q9NST1 481 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 BOKQ9UMX3 212 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-214ENST00000560402 LIPGQ9Y5X9 500 aa12.52□□□□□ -0.41
SMAD3-214ENST00000560402 NKX2-6A6NCS4 301 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 RTCAO00442 366 aaKnown RBP12.51□□□□□ -0.41
SMAD3-214ENST00000560402 SDHDO14521 159 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 UBDO15205 165 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 FGF17O60258 216 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 MGRN1O60291 552 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 ESRRBO95718 433 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 OTCP00480 354 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 TGFB1P01137 390 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 CCL3P10147 92 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 UROSP10746 265 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 GABRA1P14867 456 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 EPB42P16452 691 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 TLX1P31314 330 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-214ENST00000560402 PGM1P36871 562 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 MAGEA5P43359 124 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 ATP4BP51164 291 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 KRTAP10-9P60411 292 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 BTKQ06187 659 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 PMPCAQ10713 525 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 FOXO1Q12778 655 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 ZNF750Q32MQ0 723 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 WLSQ5T9L3 541 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 FBXW10Q5XX13 1052 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 KANK2Q63ZY3 851 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 OR4C11Q6IEV9 310 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 C16orf89Q6UX73 402 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 DDIASQ8IXT1 998 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 ST13P4Q8IZP2 240 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-214ENST00000560402 RPRMLQ8N4K4 120 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 PAQR8Q8TEZ7 354 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 TANKQ92844 425 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 RGMAQ96B86 450 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 REPS1Q96D71 796 aa12.51□□□□□ -0.41
SMAD3-214ENST00000560402 SPACA9Q96E40 222 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-214ENST00000560402 SENP5Q96HI0 755 aaPredicted RBP12.51□□□□□ -0.41
SMAD3-214ENST00000560402 OR52B2Q96RD2 323 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms