RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 PRSS38A1L453 326 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 ADAMTS4O75173 837 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 PABPC4LP0CB38 370 aaKnown RBP12.8□□□□□ -0.36
TRAF3-208ENST00000560371 GPR4P46093 362 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 TUBA1BP68363 451 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 TUBA4AP68366 448 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 SH3BP2P78314 561 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 TLE3Q04726 772 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 TUBA1AQ71U36 451 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 PDZD3Q86UT5 571 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 TMEFF1Q8IYR6 380 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 BOLLQ8N9W6 283 aaKnown RBP12.8□□□□□ -0.36
TRAF3-208ENST00000560371 ZNF784Q8NCA9 323 aaPredicted RBP12.8□□□□□ -0.36
TRAF3-208ENST00000560371 FBXL8Q96CD0 374 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 PTTG2Q9NZH5 202 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 EEDO75530 441 aaKnown RBP12.8□□□□□ -0.36
TRAF3-208ENST00000560371 HTR1EP28566 365 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 THBS2P35442 1172 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 MAGEA2P43356 314 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 CLCN2P51788 898 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 ADAM17P78536 824 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 C3orf33Q6P1S2 294 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 DPPA4Q7L190 304 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 TIGD4Q8IY51 512 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 HSFX1Q9UBD0 423 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 NUP50Q9UKX7 468 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 MAOBP27338 520 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 IRF4Q15306 451 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 CTC1Q2NKJ3 1217 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 ARHGAP11AQ6P4F7 1023 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 TM9SF4Q92544 642 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 TANKQ92844 425 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 SLC7A6OSQ96CW6 309 aaPredicted RBP12.8□□□□□ -0.36
TRAF3-208ENST00000560371 SFXN2Q96NB2 322 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 SECISBP2Q96T21 854 aaKnown RBP12.8□□□□□ -0.36
TRAF3-208ENST00000560371 OR6C2Q9NZP2 312 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 C5AR2Q9P296 337 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 ZNF69Q9UC07 566 aa12.8□□□□□ -0.36
TRAF3-208ENST00000560371 ZDBF2Q9HCK1 2354 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 FAM189A1O60320 539 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 CD68P34810 354 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-208ENST00000560371 GSCP56915 257 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-208ENST00000560371 LRRC26Q2I0M4 334 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 WSCD2Q2TBF2 565 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 PRAMEF8Q5VWM4 474 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 PRAMEF7Q5VXH5 474 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 ZNF551Q7Z340 670 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-208ENST00000560371 VWA5B2Q8N398 1253 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 IL17RCQ8NAC3 791 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 OR2L2Q8NH16 312 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 NANOS1Q8WY41 292 aaKnown RBP12.79□□□□□ -0.36
TRAF3-208ENST00000560371 MSLNLQ96KJ4 702 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 RDH12Q96NR8 316 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 OR10A4Q9H209 315 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 SLC6A15Q9H2J7 730 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 PISDQ9UG56 409 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 NUMBLQ9Y6R0 609 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 PMF1-BGLAPU3KQ54 211 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 GGT3PA6NGU5 568 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 ZSCAN5BA6NJL1 495 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 C17orf105B2RV13 164 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 BCAT2O15382 392 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-208ENST00000560371 PLATP00750 562 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 NDUFV2P19404 249 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 MAN2A2P49641 1150 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 ERVPABLB-1P60509 514 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 TDGQ13569 410 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 TRAM1Q15629 374 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 EEF1A1P5Q5VTE0 462 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 HSD11B1LQ7Z5J1 315 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 GALNT15Q8N3T1 639 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 HOXB13Q92826 284 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-208ENST00000560371 KCNN1Q92952 543 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 TRBV2A0A0J9YWF9 115 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 FMO6PO60774 539 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 IL4RP24394 825 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 GJA4P35212 333 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 ZBED5Q49AG3 693 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 BLOC1S3Q6QNY0 202 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 TMIEQ8NEW7 156 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 AIG1Q9NVV5 245 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 SH2B3Q9UQQ2 575 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 SNRNP200O75643 2136 aaKnown RBP12.79□□□□□ -0.36
TRAF3-208ENST00000560371 UGDHO60701 494 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 HOXB9P17482 250 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-208ENST00000560371 HLA-FP30511 346 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 HSD17B12Q53GQ0 312 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 ZER1Q7Z7L7 766 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 OR52E2Q8NGJ4 325 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 AP1S3Q96PC3 154 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 GJD2Q9UKL4 321 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.79□□□□□ -0.36
TRAF3-208ENST00000560371 C13orf42A0A1B0GVH6 325 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 SLC9B1P1A6NJY1 282 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 TIMP2P16035 220 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 ARHGAP19Q14CB8 494 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 MLC1Q15049 377 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 PELI2Q9HAT8 420 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 SMIM30A4D0T7 59 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms