RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 IGHEP01854 428 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 ALPLP05186 524 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 ZGLP1P0C6A0 271 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 FBLP22087 321 aaKnown RBP9.66□□□□□ -0.86
TPM1-212ENST00000558347 GSTM2P28161 218 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 EMP3P54852 163 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 GABARAPL2P60520 117 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 CSNK1G2P78368 415 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 RELAQ04206 551 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 TOP3AQ13472 1001 aaPredicted RBP9.66□□□□□ -0.86
TPM1-212ENST00000558347 PRR30Q53SZ7 412 aaPredicted RBP9.66□□□□□ -0.86
TPM1-212ENST00000558347 SLC6A19Q695T7 634 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 TMIGD1Q6UXZ0 262 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 VN1R4Q7Z5H5 301 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 LAPTM4BQ86VI4 370 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 AMER3Q8N944 861 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 OR2T12Q8NG77 320 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 CPT1CQ8TCG5 803 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 GTF2H4Q92759 462 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 RERGQ96A58 199 aaPredicted RBP9.66□□□□□ -0.86
TPM1-212ENST00000558347 C12orf43Q96C57 262 aaKnown RBP9.66□□□□□ -0.86
TPM1-212ENST00000558347 FBXL20Q96IG2 436 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 MAGED4Q96JG8 741 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 ACPTQ9BZG2 426 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 DPY30Q9C005 99 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 RHBGQ9H310 441 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 CXorf21Q9HAI6 301 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 LRTM1Q9HBL6 345 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 ZBTB20Q9HC78 741 aaPredicted RBP9.66□□□□□ -0.86
TPM1-212ENST00000558347 ATP13A2Q9NQ11 1180 aa9.66□□□□□ -0.86
TPM1-212ENST00000558347 ZNF282Q9UDV7 671 aaPredicted RBP9.66□□□□□ -0.86
TPM1-212ENST00000558347 HECTD1Q9ULT8 2610 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 TRBV5-3A0A0A0MS03 114 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 A0A0A6YYC8 382 aaPredicted RBP9.65□□□□□ -0.86
TPM1-212ENST00000558347 TRBC2A0A5B9 178 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 FEZF1A0PJY2 475 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 ELOVL7A1L3X0 281 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 I3L1I5 382 aaPredicted RBP9.65□□□□□ -0.86
TPM1-212ENST00000558347 NOL3O60936 208 aaKnown RBP9.65□□□□□ -0.86
TPM1-212ENST00000558347 SNAP29O95721 258 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 PRPS2P11908 318 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 ITGA3P26006 1051 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 TMBIM6P55061 237 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 RPL38P63173 70 aaKnown RBP9.65□□□□□ -0.86
TPM1-212ENST00000558347 PHEXP78562 749 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 OCA2Q04671 838 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 SRSF1Q07955 248 aaKnown RBP eCLIP9.65□□□□□ -0.864e-10■■■□□ 14.7
TPM1-212ENST00000558347 AIMP2Q13155 320 aaKnown RBP9.65□□□□□ -0.86
TPM1-212ENST00000558347 DSG2Q14126 1118 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 MAPKAPK3Q16644 382 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 IMPG1Q17R60 797 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 SYT16Q17RD7 645 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 RFTN2Q52LD8 501 aaPredicted RBP9.65□□□□□ -0.86
TPM1-212ENST00000558347 RUNDC3AQ59EK9 446 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 SGO1Q5FBB7 561 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 GARNL3Q5VVW2 1013 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 PRSS41Q7RTY9 318 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 ZDHHC13Q8IUH4 622 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 SHISA5Q8N114 240 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 OR11G2Q8NGC1 345 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 HDAC2Q92769 488 aaKnown RBP9.65□□□□□ -0.86
TPM1-212ENST00000558347 TMBIM1Q969X1 311 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 TBC1D20Q96BZ9 403 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 C8orf44Q96CB5 159 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 MVB12AQ96EY5 273 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 MMABQ96EY8 250 aaPredicted RBP9.65□□□□□ -0.86
TPM1-212ENST00000558347 NRBF2Q96F24 287 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 CMTM7Q96FZ5 175 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 SEPHS2Q99611 448 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 RBM4BQ9BQ04 359 aaKnown RBP9.65□□□□□ -0.86
TPM1-212ENST00000558347 MACROD1Q9BQ69 325 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 CRB3Q9BUF7 120 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 RBM4Q9BWF3 364 aaKnown RBP9.65□□□□□ -0.86
TPM1-212ENST00000558347 OSBPL10Q9BXB5 764 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 TRIM8Q9BZR9 551 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 SPNS1Q9H2V7 528 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 OCEL1Q9H607 264 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 SEMA3GQ9NS98 782 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 C1orf109Q9NX04 203 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 C5AR2Q9P296 337 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 MAP4K5Q9Y4K4 846 aa9.65□□□□□ -0.86
TPM1-212ENST00000558347 DOCK10Q96BY6 2186 aa9.65□□□□□ -0.87
TPM1-212ENST00000558347 SHANK1Q9Y566 2161 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 A0A096LPI6 279 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 MAGEB17A8MXT2 336 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 LCMT2O60294 686 aaKnown RBP9.64□□□□□ -0.87
TPM1-212ENST00000558347 MAPK1P28482 360 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 GRK3P35626 688 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 BCL6P41182 706 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 UQCRFS1P47985 274 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 NEK2P51955 445 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 EFNA3P52797 238 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 DGKQP52824 942 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 MTPNP58546 118 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 RPS15AP62244 130 aaKnown RBP9.64□□□□□ -0.87
TPM1-212ENST00000558347 MAT1AQ00266 395 aaKnown RBP9.64□□□□□ -0.87
TPM1-212ENST00000558347 MEF2AQ02078 507 aaPredicted RBP9.64□□□□□ -0.87
TPM1-212ENST00000558347 Q0VFX4 171 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 IL18R1Q13478 541 aa9.64□□□□□ -0.87
TPM1-212ENST00000558347 SELPLGQ14242 412 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms