RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PEPDP12955 493 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 ZNF708P17019 499 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 PGAM1P18669 254 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 SERPINB1P30740 379 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 SRD5A2P31213 254 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 SSTR4P31391 388 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 GGT5P36269 586 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 ACVR1BP36896 505 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 CASP2P42575 452 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 KIR2DL2P43627 348 aaPredicted RBP4.68□□□□□ -1.66
SPG11-208ENST00000558155 LHX2P50458 406 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 RAP1GDS1P52306 607 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 ARFIP1P53367 373 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 GFRA1P56159 465 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 CLDN18P56856 261 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 TNFRSF17Q02223 184 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 IRF8Q02556 426 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 DOC2AQ14183 400 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 TBCCQ15814 346 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 PPP1R3AQ16821 1122 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 CDKL4Q5MAI5 379 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 SPANXN3Q5MJ09 141 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 DEPDC1Q5TB30 811 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 C6orf163Q5TEZ5 329 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 KHDRBS2Q5VWX1 349 aaKnown RBP4.68□□□□□ -1.66
SPG11-208ENST00000558155 LIPNQ5VXI9 398 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 C18orf63Q68DL7 685 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 SULT1C3Q6IMI6 304 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 ADAM5Q6NVV9 412 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 MED27Q6P2C8 311 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 PLXDC2Q6UX71 529 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 UBE3DQ7Z6J8 389 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 ADAMTSL2Q86TH1 951 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 PLCZ1Q86YW0 608 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 CNTN4Q8IWV2 1026 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 PRR22Q8IZ63 422 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 C17orf47Q8NEP4 570 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 OR7G1Q8NGA0 311 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 ZNF473Q8WTR7 871 aaKnown RBP4.68□□□□□ -1.66
SPG11-208ENST00000558155 AKAP1Q92667 903 aaKnown RBP eCLIP4.68□□□□□ -1.66
SPG11-208ENST00000558155 ADIPOR1Q96A54 375 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 CTHRC1Q96CG8 243 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 TMCO6Q96DC7 493 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 CMTM7Q96FZ5 175 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 PLPPR2Q96GM1 343 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 SFXN2Q96NB2 322 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 BAG1Q99933 345 aaPredicted RBP4.68□□□□□ -1.66
SPG11-208ENST00000558155 PIGQQ9BRB3 760 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 NAT9Q9BTE0 207 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 G6PC3Q9BUM1 346 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 MS4A8Q9BY19 250 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 SHARPINQ9H0F6 387 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 OR10A5Q9H207 317 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 SLCO5A1Q9H2Y9 848 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 BARX1Q9HBU1 254 aaPredicted RBP4.68□□□□□ -1.66
SPG11-208ENST00000558155 SERHLQ9NQF3 203 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 TMEM160Q9NX00 188 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 KLRF1Q9NZS2 232 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 IKZF3Q9UKT9 509 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 FBN1P35555 2871 aaKnown RBP4.68□□□□□ -1.66
SPG11-208ENST00000558155 NBEAL1Q6ZS30 2694 aa4.68□□□□□ -1.66
SPG11-208ENST00000558155 HRNRQ86YZ3 2850 aaPredicted RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 YLPM1P49750 1951 aaKnown RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 ALPK2Q86TB3 2170 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 NPEPPSL1A6NEC2 478 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 NCF1BA6NI72 391 aaPredicted RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 NCF1CA8MVU1 366 aaPredicted RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 SAP18O00422 153 aaKnown RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 TAPBPO15533 448 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 ZIC3O60481 467 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 TNFRSF21O75509 655 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 AIFM1O95831 613 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 CGAP01215 116 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 ALDOAP04075 364 aaKnown RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 CLPSP04118 112 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 THBDP07204 575 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 NCF1P14598 390 aaPredicted RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 ZNF37AP17032 561 aaPredicted RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 PTX3P26022 381 aaPredicted RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 PIK3R1P27986 724 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 ABCD3P28288 659 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 MAGEA3P43357 314 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 HSPA7P48741 367 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 NEK2P51955 445 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 PGGT1BP53609 377 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 RPS3AP61247 264 aaKnown RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 SIRPAP78324 504 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 CHIT1Q13231 466 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 CRYMQ14894 314 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 TGFBIQ15582 683 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 TSNQ15631 228 aaKnown RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 PDK4Q16654 411 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 EXOC3L2Q2M3D2 409 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 C18orf21Q32NC0 220 aaPredicted RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 TEDDM1Q5T9Z0 273 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 CYB5R2Q6BCY4 276 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 ADNP2Q6IQ32 1131 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 CYP20A1Q6UW02 462 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 C22orf34Q6ZV56 151 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 VASH1Q7L8A9 365 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms