RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 MEI4A8MW99 385 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 K7ERI5 159 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 KINO60870 393 aaKnown RBP2.45□□□□□ -2.02
SPG11-206ENST00000558093 NME6O75414 186 aaPredicted RBP2.45□□□□□ -2.02
SPG11-206ENST00000558093 PRAMEF12O95522 483 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 STAMBPO95630 424 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 FGFR1OPO95684 399 aaKnown RBP2.45□□□□□ -2.02
SPG11-206ENST00000558093 IGHG3P01860 377 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 CCDC172P0C7W6 258 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 ZNF19P17023 458 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 GDF1P27539 372 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 SERPINB6P35237 376 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 RGRP47804 291 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 HNMTP50135 292 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 TNFSF10P50591 281 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 GPC3P51654 580 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 SLC25A1P53007 311 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 MFAP2P55001 183 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 BEX3Q00994 111 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 HSPA14Q0VDF9 509 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 CUL2Q13617 745 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 GIT2Q14161 759 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 SYCP1Q15431 976 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 MEP1BQ16820 701 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 KBTBD12Q3ZCT8 623 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 BOLA3Q53S33 107 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 ZNF789Q5FWF6 425 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 ACER2Q5QJU3 275 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 WDR25Q64LD2 544 aaPredicted RBP2.45□□□□□ -2.02
SPG11-206ENST00000558093 ISLR2Q6UXK2 745 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 SYCP3Q8IZU3 236 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 PARP8Q8N3A8 854 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 ANKRD20A12PQ8NF67 263 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 OR6C4Q8NGE1 309 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 OR4F5Q8NH21 305 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 RNF139Q8WU17 664 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 RAB3CQ96E17 227 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 PHYHIPLQ96FC7 376 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 CXorf58Q96LI9 332 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 CRACR2AQ9BSW2 395 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 NUSAP1Q9BXS6 441 aaKnown RBP2.45□□□□□ -2.02
SPG11-206ENST00000558093 NACA2Q9H009 215 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 C1orf21Q9H246 121 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 CXXC4Q9H2H0 198 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 MMADHCQ9H3L0 296 aaPredicted RBP2.45□□□□□ -2.02
SPG11-206ENST00000558093 NCOR1P1Q9H4R4 102 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 VCPKMTQ9H867 229 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 PDFQ9HBH1 243 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 SLC25A19Q9HC21 320 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 HOMER3Q9NSC5 361 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 ABCB8Q9NUT2 735 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 PRO0461Q9UI25 63 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 IKZF3Q9UKT9 509 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 NOSIPQ9Y314 301 aaKnown RBP2.45□□□□□ -2.02
SPG11-206ENST00000558093 TMED5Q9Y3A6 229 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 IGKV6D-21A0A0A0MT36 114 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 A0A0U1RQK1 487 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 TMEM129A0AVI4 362 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 CLRN2A0PK11 232 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 ZNF320A2RRD8 509 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 H0Y9J4 135 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 SAP18O00422 153 aaKnown RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 POLR3GO15318 223 aaPredicted RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 GMNNO75496 209 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 PALMO75781 387 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 REC8O95072 547 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 NUDT14O95848 222 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 GOT2P00505 430 aaKnown RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 IFNB1P01574 187 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 EPOP01588 193 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 CHRNGP07510 517 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 SNRPCP09234 159 aaKnown RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 GIG44P09565 113 aaPredicted RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 HMOX1P09601 288 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 NUDT17P0C025 328 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 CT45A8P0DMV1 189 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 CT45A9P0DMV2 189 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 PGAM2P15259 253 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 GDI1P31150 447 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 PRKAR2BP31323 418 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 RDXP35241 583 aaKnown RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 MDH2P40926 338 aaKnown RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 MAGEA8P43361 318 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 IFNAR2P48551 515 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 ETV1P50549 477 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 ARHGDIAP52565 204 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 SNU13P55769 128 aaKnown RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 TRDNQ13061 729 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 CBX3Q13185 183 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 LASP1Q14847 261 aaKnown RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 MICAQ29983 383 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 KRTAP13-3Q3SY46 172 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 IFI44LQ53G44 452 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 CT45A2Q5DJT8 189 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 CCDC122Q5T0U0 273 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 TPGS2Q68CL5 300 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 CGB2Q6NT52 195 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 APOOLQ6UXV4 268 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 LAX1Q8IWV1 398 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 FBXW8Q8N3Y1 598 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms