RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 OR51I1Q9H343 314 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 YY1AP1Q9H869 796 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 ZCCHC3Q9NUD5 404 aaKnown RBP6.91□□□□□ -1.3
SPG11-204ENST00000557866 ZSCAN32Q9NX65 697 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 NTMQ9P121 344 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 KLHL3Q9UH77 587 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 PLCL2Q9UPR0 1127 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 KCNE3Q9Y6H6 103 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 ZNF780BQ9Y6R6 833 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 MUC3AQ02505 3323 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 SPAG17Q6Q759 2223 aa6.91□□□□□ -1.3
SPG11-204ENST00000557866 NUP214P35658 2090 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 A0A0A6YYC8 382 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 HYKKA2RU49 373 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 FITM1A5D6W6 292 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 PATE3B3GLJ2 98 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 I3L1I5 382 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 PAX4O43316 350 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 EMC8O43402 210 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 SUV39H1O43463 412 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 LDB3O75112 727 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 DIRAS1O95057 198 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 MFN2O95140 757 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 PGM3O95394 542 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 ZBTB11O95625 1053 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 GPR75O95800 540 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 BCHEP06276 602 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 FHP07954 510 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 CHRM4P08173 479 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 UBTFL6P0CB48 400 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 CPMP14384 443 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 ZNF23P17027 643 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 ZNF10P21506 573 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 FUT4P22083 530 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 TLX1P31314 330 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 MPIP34949 423 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 ADMP35318 185 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 DCTP40126 519 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 GPR3P46089 330 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 HSPA13P48723 471 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 ARRB1P49407 418 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 MAN2A2P49641 1150 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 RAB38P57729 211 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 SELENOWP63302 87 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 MRPS35P82673 323 aaKnown RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 MAT1AQ00266 395 aaKnown RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 MGAT2Q10469 447 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 DAG1Q14118 895 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 LASP1Q14847 261 aaKnown RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 PDK3Q15120 406 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 SYPL1Q16563 259 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 CYP27C1Q4G0S4 372 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 ZNF628Q5EBL2 1059 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 OTUD3Q5T2D3 398 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 FHL5Q5TD97 284 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 REEP3Q6NUK4 255 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 GUSBP11Q6P575 273 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 FAM111BQ6SJ93 734 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 DGAT2L6Q6ZPD8 337 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 FKBP9P1Q75LS8 142 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 CEP68Q76N32 757 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 PIWIL3Q7Z3Z3 882 aaKnown RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 TMPRSS9Q7Z410 1059 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 COMTD1Q86VU5 262 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 CARM1Q86X55 608 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 SLC44A2Q8IWA5 706 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 SLC30A8Q8IWU4 369 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 CHERPQ8IWX8 916 aaKnown RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 LRRC25Q8N386 305 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 ZNF655Q8N720 491 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 SMYD1Q8NB12 490 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 NUP43Q8NFH3 380 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 OR56A1Q8NGH5 318 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 OR2I1PQ8NGU4 316 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 OR5K1Q8NHB7 308 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 MIPOL1Q8TD10 442 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 APOBEC4Q8WW27 367 aaKnown RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 XAGE5Q8WWM1 108 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 TFAP2CQ92754 450 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 ZDHHC12Q96GR4 267 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 TPD52L3Q96J77 140 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 NR1H4Q96RI1 486 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 NUDT22Q9BRQ3 303 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 OSBPL11Q9BXB4 747 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 VCXQ9H320 206 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 GSX1Q9H4S2 264 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 SMURF2Q9HAU4 748 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 CAPN10Q9HC96 672 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 ANKHQ9HCJ1 492 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 PDE7BQ9NP56 450 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 C8orf4Q9NR00 106 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 SEMA3GQ9NS98 782 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 GIMAP4Q9NUV9 329 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 MS4A12Q9NXJ0 267 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 NLGN3Q9NZ94 848 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 NDUFAF4Q9P032 175 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 SUSD2Q9UGT4 822 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 PSME2Q9UL46 239 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 RAB23Q9ULC3 237 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 ANGPT4Q9Y264 503 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms