RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SSX3Q99909 188 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 JPH2Q9BR39 696 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ACBD6Q9BR61 282 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TRIM62Q9BVG3 475 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PARD6GQ9BYG4 376 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 BCL2L14Q9BZR8 327 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 S1PR5Q9H228 398 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF696Q9H7X3 374 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 NEK6Q9HC98 313 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 RPRD1BQ9NQG5 326 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ARMC1Q9NVT9 282 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 FAM120CQ9NX05 1096 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SOHLH2Q9NX45 425 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CYP39A1Q9NYL5 469 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 EMC3Q9P0I2 261 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 C19orf25Q9UFG5 118 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 KCNN3Q9UGI6 736 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 LNPEPQ9UIQ6 1025 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 FAF1Q9UNN5 650 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ERGIC3Q9Y282 383 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TMED3Q9Y3Q3 217 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PUS1Q9Y606 427 aaKnown RBP eCLIP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 AP1M2Q9Y6Q5 423 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 LRPPRCP42704 1394 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TOP2AP11388 1531 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 UBN2Q6ZU65 1347 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 IGHV3-20A0A0C4DH32 117 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 A0A0J9YVX5 310 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ESYT2A0FGR8 921 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 MEIOCA2RUB1 952 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 FUOMA2VDF0 154 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GOLGA8IPA6NC78 632 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF716A6NP11 495 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 K7ERQ8 282 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 EPHB6O15197 1021 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TOX3O15405 576 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 MYO1DO94832 1006 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CSF2P04141 144 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 IL6P05231 212 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 APRTP07741 180 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF735P0CB33 412 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 UROSP10746 265 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CPA3P15088 417 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GNSP15586 552 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PRKACAP17612 351 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 HLA-DPA1P20036 260 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GTF2H1P32780 548 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PLK1P53350 603 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CLDN8P56748 225 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 XIAPP98170 497 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TSPY1Q01534 308 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SLC34A1Q06495 639 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SLC3A1Q07837 685 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 IL24Q13007 206 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PMS2P3Q13401 168 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GCKRQ14397 625 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC40Q4G0X9 1142 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PHLDA2Q53GA4 152 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 LCN1P1Q5VSP4 162 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF776Q68DI1 518 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 KCTD11Q693B1 232 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SNRNP48Q6IEG0 339 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 DHRS11Q6UWP2 260 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 FRRS1Q6ZNA5 592 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 IDO2Q6ZQW0 420 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SPATA4Q8NEY3 305 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 OR5M1Q8NGP8 315 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 OR4C3Q8NH37 302 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 FANK1Q8TC84 345 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TCP10LQ8TDR4 215 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 U2AF1L4Q8WU68 220 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SUSD6Q92537 303 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 EFHD2Q96C19 240 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PYCR2Q96C36 320 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 FAM111AQ96PZ2 611 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 BTBD9Q96Q07 612 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TESK2Q96S53 571 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ALKBH7Q9BT30 221 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GTPBP2Q9BX10 602 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 CARD6Q9BX69 1037 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GPR61Q9BZJ8 451 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 DERL2Q9GZP9 239 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SLC26A1Q9H2B4 701 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 RIMS4Q9H426 269 aaPredicted RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SLC52A3Q9NQ40 469 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SAMSN1Q9NSI8 373 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SLC35D1Q9NTN3 355 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 MRPS18BQ9Y676 258 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SELENOKQ9Y6D0 94 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 SMG6Q86US8 1419 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GRIN2DO15399 1336 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 FAM205AQ6ZU69 1335 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 MYH14Q7Z406 1995 aaKnown RBP1.47□□□□□ -2.17
HIF1A-212ENST00000557538 A0A1B0GUA9 196 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 TMEM129A0AVI4 362 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 ARHGEF37A1IGU5 675 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 KRT87PA6NCN2 255 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 GABRR3A8MPY1 467 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 A8MX80 341 aa1.47□□□□□ -2.17
HIF1A-212ENST00000557538 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms