RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 RRAS2P62070 204 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 RPS26P62854 115 aaKnown RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 FOXD4Q12950 439 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 DSG2Q14126 1118 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 FLYWCH1Q4VC44 716 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 ARSIQ5FYB1 569 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 ASTLQ6HA08 431 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 ACSM5Q6NUN0 579 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 ZNF765Q7L2R6 523 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 BCDIN3DQ7Z5W3 292 aaKnown RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 TDHQ8IZJ6 230 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 TM9SF4Q92544 642 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 CREB3L1Q96BA8 519 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 VWCEQ96DN2 955 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 AIF1LQ9BQI0 150 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 IRF2BPLQ9H1B7 796 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 MVB12BQ9H7P6 319 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 TRIM45Q9H8W5 580 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 STMN3Q9NZ72 180 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 HELZP42694 1942 aaKnown RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 SOD1P00441 154 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 FHP07954 510 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 PSKH1P11801 424 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 BSGP35613 385 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 HSD17B2P37059 387 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 INPP1P49441 399 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 KHKP50053 298 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 P2RX3P56373 397 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 HOXC5Q00444 222 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 FABP5Q01469 135 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 PIN1Q13526 163 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 WSCD2Q2TBF2 565 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 CCNJQ5T5M9 372 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 UTS2BQ765I0 119 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 ADIPOR2Q86V24 386 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 RBM45Q8IUH3 476 aaKnown RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 ADGRF3Q8IZF5 1079 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 CELF5Q8N6W0 485 aaKnown RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 POGLUT1Q8NBL1 392 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 ZNF485Q8NCK3 441 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 RAB8BQ92930 207 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 RAD51AP1Q96B01 352 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 SCLYQ96I15 445 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 SLC35G5Q96KT7 338 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 ATF6BQ99941 703 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 JAM3Q9BX67 310 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 MS4A8Q9BY19 250 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 ZNF717Q9BY31 904 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-232ENST00000557487 BTBD1Q9H0C5 482 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 ANKRD19PQ9H560 264 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 MED17Q9NVC6 651 aa15.37■□□□□ 0.05
SHMT2-232ENST00000557487 PRR23AA6NEV1 266 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 UBXN7O94888 489 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 NR2F1P10589 423 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 APEX1P27695 318 aaKnown RBP15.36■□□□□ 0.05
SHMT2-232ENST00000557487 ACADLP28330 430 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 HTR2BP41595 481 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 MEF2AQ02078 507 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-232ENST00000557487 MRPL28Q13084 256 aaKnown RBP15.36■□□□□ 0.05
SHMT2-232ENST00000557487 ADAM15Q13444 863 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 ARHGAP19Q14CB8 494 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 PSRC1Q6PGN9 363 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-232ENST00000557487 KIAA0907Q7Z7F0 614 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-232ENST00000557487 IQCHQ86VS3 1027 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 C17orf64Q86WR6 236 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 NUDT13Q86X67 352 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 ANKK1Q8NFD2 765 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 OR52N1Q8NH53 320 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 DEDD2Q8WXF8 326 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 GATAD2BQ8WXI9 593 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 SMG7Q92540 1137 aaKnown RBP15.36■□□□□ 0.05
SHMT2-232ENST00000557487 OTULINQ96BN8 352 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 DTD2Q96FN9 168 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 HYLS1Q96M11 299 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 UBL7Q96S82 380 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-232ENST00000557487 RSPO3Q9BXY4 272 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-232ENST00000557487 PCBD2Q9H0N5 130 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 FOLH1BQ9HBA9 442 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 MAN2C1Q9NTJ4 1040 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 COMMD3Q9UBI1 195 aa15.36■□□□□ 0.05
SHMT2-232ENST00000557487 DENND4CQ5VZ89 1909 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 CPNE3O75131 537 aaKnown RBP15.35■□□□□ 0.05
SHMT2-232ENST00000557487 FGBP02675 491 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 LRG1P02750 347 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 LIMS3P0CW19 117 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 LIMS4P0CW20 117 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 DRD2P14416 443 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 BDH1Q02338 343 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 HSPB3Q12988 150 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 TSPAN31Q12999 210 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 IL18Q14116 193 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 TMEM240Q5SV17 173 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 SPOUT1Q5T280 376 aaKnown RBP15.35■□□□□ 0.05
SHMT2-232ENST00000557487 OR2G6Q5TZ20 316 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 BHLHB9Q6PI77 547 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 RASSF6Q6ZTQ3 369 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 TRMT11Q7Z4G4 463 aaKnown RBP15.35■□□□□ 0.05
SHMT2-232ENST00000557487 TMEM25Q86YD3 366 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 MMP21Q8N119 569 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 ARIH2OSQ8N7S6 290 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms