RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-210	ENST00000557431	NTNG2	Q96CW9	530 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	NSUN5	Q96P11	429 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	NAPG	Q99747	312 aa	Predicted RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	NOL11	Q9H8H0	719 aa	Known RBP	12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	MAT2B	Q9NZL9	334 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	KLRF1	Q9NZS2	232 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	SAR1B	Q9Y6B6	198 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	IKBKG	Q9Y6K9	419 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	CR1	P17927	2039 aa		12.81	□□□□□ -0.36
SLIRP-210	ENST00000557431	HMX2	A2RU54	273 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431		B4DXG7	233 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	ERAL1	O75616	437 aa	Known RBP	12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	C2	P06681	752 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	GALNS	P34059	522 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	MRPS35	P82673	323 aa	Known RBP	12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	PLCXD2	Q0VAA5	305 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	MGAT2	Q10469	447 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	CBLB	Q13191	982 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	CUL3	Q13618	768 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	UAP1	Q16222	522 aa	Predicted RBP	12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	PRICKLE4	Q2TBC4	344 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431		Q5PR19	223 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	C6orf163	Q5TEZ5	329 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	MROH9	Q5TGP6	573 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	OR5M10	Q6IEU7	315 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	TAOK1	Q7L7X3	1001 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	PRIMA1	Q86XR5	153 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	WDSUB1	Q8N9V3	476 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	C7orf57	Q8NEG2	295 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	OR14L1P	Q8NHC6	308 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	PIGQ	Q9BRB3	760 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	ERP44	Q9BS26	406 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	CALHM2	Q9HA72	323 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	FARSB	Q9NSD9	589 aa	Known RBP	12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	WHRN	Q9P202	907 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	FBXL2	Q9UKC9	423 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	ACOT9	Q9Y305	439 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	PLLP	Q9Y342	182 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	TSC22D4	Q9Y3Q8	395 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	FREM1	Q5H8C1	2179 aa		12.8	□□□□□ -0.36
SLIRP-210	ENST00000557431	CSPG4	Q6UVK1	2322 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431		H7C1Q1	480 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	EIF3H	O15372	352 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	CBX7	O95931	251 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	TGM6	O95932	706 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	IL18BP	O95998	194 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	POR	P16435	677 aa	Predicted RBP	12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	PCSK6	P29122	969 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	CRABP2	P29373	138 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	PAFAH1B1	P43034	410 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	PLTP	P55058	493 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	RPP38	P78345	283 aa	Known RBP	12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	TRMT12	Q53H54	448 aa	Known RBP	12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	VWA1	Q6PCB0	445 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	L3MBTL4	Q8NA19	623 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	OR52R1	Q8NGF1	315 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	ZPLD1	Q8TCW7	415 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	ATP6V1E2	Q96A05	226 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	REPS1	Q96D71	796 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	ARSG	Q96EG1	525 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	PHF21B	Q96EK2	531 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431		Q96MF0	132 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	SECISBP2	Q96T21	854 aa	Known RBP	12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	HBEGF	Q99075	208 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	ZBTB26	Q9HCK0	441 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	CLCF1	Q9UBD9	225 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	JMJD1C	Q15652	2540 aa		12.79	□□□□□ -0.36
SLIRP-210	ENST00000557431	PRAMEF25	A6NGN4	478 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	SYCE1L	A8MT33	242 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	PLOD2	O00469	737 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	CLDN9	O95484	217 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	ACTL6A	O96019	429 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	PCSK2	P16519	638 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	TSPAN8	P19075	237 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	MAGEA4	P43358	317 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	CCNG1	P51959	295 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	ARFIP1	P53367	373 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	ALDH18A1	P54886	795 aa	Known RBP	12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	FAM27E3	Q08E93	113 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	TRAF3	Q13114	568 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	TECRL	Q5HYJ1	363 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	CCNYL2	Q5T2Q4	361 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	TTC19	Q6DKK2	380 aa	Predicted RBP	12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	ZDHHC24	Q6UX98	284 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	ADGRE4P	Q86SQ3	457 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	P3H2	Q8IVL5	708 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	RHEBL1	Q8TAI7	183 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	FBXO25	Q8TCJ0	367 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	ZNF592	Q92610	1267 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	TMBIM1	Q969X1	311 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	LCOR	Q96JN0	433 aa	Predicted RBP	12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	DACH2	Q96NX9	599 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	GPR78	Q96P69	363 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	SERPINI1	Q99574	410 aa		12.78	□□□□□ -0.36
SLIRP-210	ENST00000557431	MDFI	Q99750	246 aa		12.78	□□□□□ -0.36

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