RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 RESP18Q5W5W9 173 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 TCEAL6Q6IPX3 200 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 CCDC73Q6ZRK6 1079 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 GPR141Q7Z602 305 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 CAMKVQ8NCB2 501 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 NUS1Q96E22 293 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 AK8Q96MA6 479 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 MBOAT7Q96N66 472 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 RCHY1Q96PM5 261 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 SLC25A23Q9BV35 468 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 PINK1Q9BXM7 581 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 CUEDC2Q9H467 287 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 CLSTN2Q9H4D0 955 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 C10orf88Q9H8K7 445 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 RPF1Q9H9Y2 349 aaKnown RBP2.91□□□□□ -1.94
VRK1-207ENST00000557352 MAGEF1Q9HAY2 307 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 PLEKHA3Q9HB20 300 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 C6orf50Q9HD87 102 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 VPS54Q9P1Q0 977 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 UBQLN2Q9UHD9 624 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 NRBP1Q9UHY1 535 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 MGAT4AQ9UM21 535 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 ABCB11O95342 1321 aa2.91□□□□□ -1.94
VRK1-207ENST00000557352 TEX48A0A1B0GUV7 120 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 LOC390937A0A1W2PQ73 354 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 BCLAF3A2AJT9 711 aaKnown RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 SMCO2A6NFE2 343 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 H7C0S8 307 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 MPHOSPH10O00566 681 aaKnown RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 FBP2O00757 339 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 CXCL11O14625 94 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 HDAC3O15379 428 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 KINO60870 393 aaKnown RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 TBCAO75347 108 aaKnown RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 PENKP01210 267 aaPredicted RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 MUTP22033 750 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 EPHX2P34913 555 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 NF2P35240 595 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 COPB2P35606 906 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 LONP1P36776 959 aaKnown RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 EPS15P42566 896 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 CDX1P47902 265 aaPredicted RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 RAD23AP54725 363 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 NAPAP54920 295 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 PDIA5Q14554 519 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 CDC37Q16543 378 aaPredicted RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 QRICH1Q2TAL8 776 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 CAVIN1Q6NZI2 390 aaKnown RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 ARMCX5Q6P1M9 558 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 FAM173BQ6P4H8 233 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 ERN2Q76MJ5 926 aaKnown RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 NIPA1Q7RTP0 329 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 FAM219AQ8IW50 185 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 CD99L2Q8TCZ2 262 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 DCPSQ96C86 337 aaKnown RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 GBP5Q96PP8 586 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 BPIFA3Q9BQP9 254 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 NAA11Q9BSU3 229 aaPredicted RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 KATNB1Q9BVA0 655 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 RAB34Q9BZG1 259 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 CCSER1Q9C0I3 900 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 PSTPIP2Q9H939 334 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 SLC38A10Q9HBR0 1119 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 ARMCX1Q9P291 453 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 HOOK1Q9UJC3 728 aaKnown RBP2.9□□□□□ -1.95
VRK1-207ENST00000557352 ANAPC5Q9UJX4 755 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 CPQQ9Y646 472 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 SCN10AQ9Y5Y9 1956 aa2.9□□□□□ -1.95
VRK1-207ENST00000557352 TRAV9-2A0A087WT02 112 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 PRSS46E5RG02 174 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 ANHXE9PGG2 379 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 NPIPA3F8WFD2 350 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 PGRMC2O15173 223 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 NEMFO60524 1076 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 STAM2O75886 525 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 PIGRP01833 764 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 GOLGA8HP0CJ92 632 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 CCDC192P0DO97 292 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 PSMA3P25788 255 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 SYKP43405 635 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 OR3A3P47888 321 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 IST1P53990 364 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 MZT1Q08AG7 82 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 PPIL2Q13356 520 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 PCK2Q16822 640 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 SHROOM1Q2M3G4 852 aaPredicted RBP2.89□□□□□ -1.95
VRK1-207ENST00000557352 FAM133BQ5BKY9 247 aaKnown RBP2.89□□□□□ -1.95
VRK1-207ENST00000557352 KRBOX4Q5JUW0 171 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.89□□□□□ -1.95
VRK1-207ENST00000557352 RFWD3Q6PCD5 774 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 BTNL8Q6UX41 500 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 C11orf57Q6ZUT1 292 aaPredicted RBP2.89□□□□□ -1.95
VRK1-207ENST00000557352 SLFN11Q7Z7L1 901 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 ERO1BQ86YB8 467 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 CROCCP3Q8IVE0 287 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 NAXDQ8IW45 347 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 IQUBQ8NA54 791 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 KIF18AQ8NI77 898 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 ACER1Q8TDN7 264 aa2.89□□□□□ -1.95
VRK1-207ENST00000557352 GRK7Q8WTQ7 553 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms