RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 OR5M10Q6IEU7 315 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 LRRC8EQ6NSJ5 796 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 PAQR3Q6TCH7 311 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 UBE3DQ7Z6J8 389 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 ACOT4Q8N9L9 421 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 BBOF1Q8ND07 529 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 TTLQ8NG68 377 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 HGDQ93099 445 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 NDNQ99608 321 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 DNAJC7Q99615 494 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 BPIFA3Q9BQP9 254 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 FOLH1BQ9HBA9 442 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 NGBQ9NPG2 151 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 FANCFQ9NPI8 374 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 RYDENQ9NUL5 291 aaKnown RBP11.16□□□□□ -0.62
PSEN1-220ENST00000557037 EHD3Q9NZN3 535 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 SOX13Q9UN79 622 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 ZNF175Q9Y473 711 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 KCNE2Q9Y6J6 123 aa11.16□□□□□ -0.62
PSEN1-220ENST00000557037 ESYT3A0FGR9 886 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 ANKDD1BA6NHY2 528 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 SHISA9B4DS77 424 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 TNFRSF21O75509 655 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 PPM1BO75688 479 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 ALDOAP04075 364 aaKnown RBP11.15□□□□□ -0.62
PSEN1-220ENST00000557037 ZSCAN5DPP0CG00 497 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 C1GALT1C1LP0DN25 315 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 PEPDP12955 493 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 PSMB1P20618 241 aaKnown RBP11.15□□□□□ -0.62
PSEN1-220ENST00000557037 ATP5A1P25705 553 aaKnown RBP11.15□□□□□ -0.62
PSEN1-220ENST00000557037 SLC1A2P43004 574 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 AP1S2P56377 157 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 TGM3Q08188 693 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 THOC5Q13769 683 aaKnown RBP11.15□□□□□ -0.62
PSEN1-220ENST00000557037 SPRED3Q2MJR0 410 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 C11orf71Q6IPW1 123 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 SLCO4C1Q6ZQN7 724 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 RINLQ6ZS11 566 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 PEG10Q86TG7 708 aaKnown RBP11.15□□□□□ -0.62
PSEN1-220ENST00000557037 PLCZ1Q86YW0 608 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 ST13P4Q8IZP2 240 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-220ENST00000557037 STEAP2Q8NFT2 490 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 OR6K3Q8NGY3 331 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 FAM216AQ8WUB2 273 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 ADIPOR1Q96A54 375 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 BTBD9Q96Q07 612 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 TRIM54Q9BYV2 358 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 OR10A4Q9H209 315 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 METTL17Q9H7H0 456 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-220ENST00000557037 WHRNQ9P202 907 aa11.15□□□□□ -0.62
PSEN1-220ENST00000557037 PRAMEF25A6NGN4 478 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 VWC2LB2RUY7 222 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 HAUS5O94927 633 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 PLGP00747 810 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-220ENST00000557037 CSF3P09919 207 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 ADH6P28332 368 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 NR4A2P43354 598 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 SLC6A8P48029 635 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 KCNC1P48547 511 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 CLDN20P56880 219 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 EEFSECP57772 596 aaKnown RBP11.14□□□□□ -0.63
PSEN1-220ENST00000557037 LGALS3BPQ08380 585 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 CARTPTQ16568 116 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 IQCCQ4KMZ1 466 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 C18orf63Q68DL7 685 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 FIGNL1Q6PIW4 674 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 BEND4Q6ZU67 534 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 NUP54Q7Z3B4 507 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 OR5M1Q8NGP8 315 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 PIWIL2Q8TC59 973 aaKnown RBP11.14□□□□□ -0.63
PSEN1-220ENST00000557037 KCNC2Q96PR1 638 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 ZNF747Q9BV97 191 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 SORBS1Q9BX66 1292 aaKnown RBP11.14□□□□□ -0.63
PSEN1-220ENST00000557037 NXF5Q9H1B4 397 aaKnown RBP11.14□□□□□ -0.63
PSEN1-220ENST00000557037 C12orf49Q9H741 205 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 RPF2Q9H7B2 306 aaKnown RBP11.14□□□□□ -0.63
PSEN1-220ENST00000557037 PRM3Q9NNZ6 103 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 CBLN4Q9NTU7 201 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 COMMD10Q9Y6G5 202 aa11.14□□□□□ -0.63
PSEN1-220ENST00000557037 EPN1Q9Y6I3 576 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-220ENST00000557037 C17orf51A8MQB3 221 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 EFCAB8A8MWE9 144 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 UGT2B11O75310 529 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 NTN1O95631 604 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 AIFM1O95831 613 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 IL32P24001 234 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 STIP1P31948 543 aaKnown RBP11.13□□□□□ -0.63
PSEN1-220ENST00000557037 HPDP32754 393 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-220ENST00000557037 TTKP33981 857 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 MAGEA1P43355 309 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 EFNA4P52798 201 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 PGGT1BP53609 377 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 KLF1Q13351 362 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-220ENST00000557037 C18orf21Q32NC0 220 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-220ENST00000557037 SHISA2Q6UWI4 295 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 SEZ6L2Q6UXD5 910 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 KRT78Q8N1N4 520 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 MCUQ8NE86 351 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 C7orf57Q8NEG2 295 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 OMA1Q96E52 524 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms