RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 BRINP2Q9C0B6 783 aa11.77□□□□□ -0.53
PSEN1-219ENST00000556951 LRMDAQ9H2I8 198 aa11.77□□□□□ -0.53
PSEN1-219ENST00000556951 TP63Q9H3D4 680 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-219ENST00000556951 LANCL2Q9NS86 450 aa11.77□□□□□ -0.53
PSEN1-219ENST00000556951 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.77□□□□□ -0.53
PSEN1-219ENST00000556951 ZIM2Q9NZV7 527 aa11.77□□□□□ -0.53
PSEN1-219ENST00000556951 HCN3Q9P1Z3 774 aa11.77□□□□□ -0.53
PSEN1-219ENST00000556951 VPS29Q9UBQ0 182 aa11.77□□□□□ -0.53
PSEN1-219ENST00000556951 SCN3AQ9NY46 2000 aa11.77□□□□□ -0.53
PSEN1-219ENST00000556951 FEZF1A0PJY2 475 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 CFAP73A6NFT4 308 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 DNAJB6O75190 326 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 SLC22A3O75751 556 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 MYO1DO94832 1006 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 PRPS2P11908 318 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 HLCSP50747 726 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 DGKQP52824 942 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 RPL38P63173 70 aaKnown RBP11.76□□□□□ -0.53
PSEN1-219ENST00000556951 STX5Q13190 355 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 DDX39BQ13838 428 aaKnown RBP11.76□□□□□ -0.53
PSEN1-219ENST00000556951 SNTB1Q13884 538 aaKnown RBP11.76□□□□□ -0.53
PSEN1-219ENST00000556951 KIAA0040Q15053 153 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 NDUFA9Q16795 377 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 MFSD4BQ5TF39 518 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 PAOXQ6QHF9 649 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 CAMKMTQ7Z624 323 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 SNX32Q86XE0 403 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 PDSS2Q86YH6 399 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 ARMC10Q8N2F6 343 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 POU5F2Q8N7G0 328 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 POGLUT1Q8NBL1 392 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 TTLQ8NG68 377 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 TSPEARQ8WU66 669 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 TSLPQ969D9 159 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 GPATCH1Q9BRR8 931 aaKnown RBP11.76□□□□□ -0.53
PSEN1-219ENST00000556951 C1orf50Q9BV19 199 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 SPNS1Q9H2V7 528 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 PRM3Q9NNZ6 103 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 DMRT3Q9NQL9 472 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 RASSF1Q9NS23 344 aa11.76□□□□□ -0.53
PSEN1-219ENST00000556951 ANK3Q12955 4377 aaKnown RBP11.76□□□□□ -0.53
PSEN1-219ENST00000556951 ZNF407Q9C0G0 2248 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 TRBC2A0A5B9 178 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 FAM234BA2RU67 622 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 ANKDD1BA6NHY2 528 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 MAGEB17A8MXT2 336 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 ANKRD65E5RJM6 399 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 SGK494L7N484 410 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 GYG2O15488 501 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 PEX1O43933 1283 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 PDE9AO76083 593 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 G6PDP11413 515 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 IL1RNP18510 177 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 GSTM2P28161 218 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 GRK3P35626 688 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 CYB561P49447 251 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 CORO7P57737 925 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 RPS13P62277 151 aaKnown RBP11.75□□□□□ -0.53
PSEN1-219ENST00000556951 MEF2AQ02078 507 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-219ENST00000556951 GXYLT1Q4G148 440 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 RTL6Q6ICC9 239 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 TMEM214Q6NUQ4 689 aaKnown RBP11.75□□□□□ -0.53
PSEN1-219ENST00000556951 CYP20A1Q6UW02 462 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 RINLQ6ZS11 566 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 ZZZ3Q8IYH5 903 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 ZFP62Q8NB50 900 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-219ENST00000556951 ZNF740Q8NDX6 193 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 NFAM1Q8NET5 270 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-219ENST00000556951 RERGQ96A58 199 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-219ENST00000556951 TM4SF19Q96DZ7 209 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 APIPQ96GX9 242 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 FCRL1Q96LA6 429 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 LPAR4Q99677 370 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 SARGQ9BW04 601 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 C1orf21Q9H246 121 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 EFCAB1Q9HAE3 211 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 SLC24A3Q9HC58 644 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 SIRT5Q9NXA8 310 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 TAS2R1Q9NYW7 299 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 CCDC167Q9P0B6 97 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 EDARQ9UNE0 448 aa11.75□□□□□ -0.53
PSEN1-219ENST00000556951 RRP15Q9Y3B9 282 aaKnown RBP11.75□□□□□ -0.53
PSEN1-219ENST00000556951 TFECO14948 347 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-219ENST00000556951 OR1F1O43749 312 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 CDC40O60508 579 aaKnown RBP eCLIP11.74□□□□□ -0.53
PSEN1-219ENST00000556951 BCKDHAP12694 445 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 CPA2P48052 419 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 NME5P56597 212 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 TAS2R50P59544 299 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 UFM1P61960 85 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 MXRA7P84157 204 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 ACSM2AQ08AH3 577 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 TBL3Q12788 808 aaKnown RBP11.74□□□□□ -0.53
PSEN1-219ENST00000556951 CUL3Q13618 768 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 NSDHLQ15738 373 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 DNAL1Q4LDG9 190 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 SPIN4Q56A73 249 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 ACSM2BQ68CK6 577 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 NOXRED1Q6NXP6 359 aa11.74□□□□□ -0.53
PSEN1-219ENST00000556951 BLOC1S3Q6QNY0 202 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms