RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 HSPA4LO95757 839 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 RFPL3SP0C7P2 107 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 DHRS4L1P0CG22 281 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 PCSK2P16519 638 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 CSNK2A2P19784 350 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-224ENST00000556737 AGAP20933 346 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 ENDOUP21128 410 aaKnown RBP9.49□□□□□ -0.89
SHMT2-224ENST00000556737 SERPINB3P29508 390 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 ALDH9A1P49189 494 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 FBXW4P57775 412 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 NAA20P61599 178 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 MRPS35P82673 323 aaKnown RBP9.49□□□□□ -0.89
SHMT2-224ENST00000556737 ACSM2AQ08AH3 577 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 EXOSC7Q15024 291 aaKnown RBP9.49□□□□□ -0.89
SHMT2-224ENST00000556737 RPS6KA2Q15349 733 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 NNATQ16517 81 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 PRSS53Q2L4Q9 553 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 TRMT12Q53H54 448 aaKnown RBP9.49□□□□□ -0.89
SHMT2-224ENST00000556737 C6orf163Q5TEZ5 329 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 SLC22A10Q63ZE4 541 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 ACSM2BQ68CK6 577 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 ARHGAP11AQ6P4F7 1023 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 TRILQ7L0X0 811 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 TRIM46Q7Z4K8 759 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 CPLX4Q7Z7G2 160 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 SLC22A16Q86VW1 577 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 PRR22Q8IZ63 422 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 RPRMLQ8N4K4 120 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 FAM13CQ8NE31 585 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 ADCY4Q8NFM4 1077 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.49□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF675Q8TD23 568 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF75CPQ92670 426 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-224ENST00000556737 VKORC1Q9BQB6 163 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 SHCBP1LQ9BZQ2 653 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 BRINP2Q9C0B6 783 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 CNIH4Q9P003 139 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 UTS2RQ9UKP6 389 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 EXO1Q9UQ84 846 aaKnown RBP9.49□□□□□ -0.89
SHMT2-224ENST00000556737 ENTPD4Q9Y227 616 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 KLF2Q9Y5W3 355 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-224ENST00000556737 PTGDR2Q9Y5Y4 395 aa9.49□□□□□ -0.89
SHMT2-224ENST00000556737 CACNA1CQ13936 2221 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 GNG14A0A1W2PPG7 69 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 GMNCA6NCL1 334 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 NPIPB8E9PQR5 432 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 PRRG2O14669 202 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 TRIM3O75382 744 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-224ENST00000556737 SERPINE1P05121 402 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 TPOP07202 933 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 ANXA4P09525 319 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-224ENST00000556737 UROSP10746 265 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 ESRRAP11474 423 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-224ENST00000556737 DRD2P14416 443 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 PRPH2P23942 346 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 ABCD3P28288 659 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 GSTM5P46439 218 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 EMDP50402 254 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 SEC24CP53992 1094 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 KCNJ2P63252 427 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 BTKQ06187 659 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF763Q0D2J5 394 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 BST1Q10588 318 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 SF3A3Q12874 501 aaKnown RBP eCLIP9.48□□□□□ -0.891e-13■■■□□ 16.4
SHMT2-224ENST00000556737 FNDC7Q5VTL7 733 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 BICRALQ6AI39 1079 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 CLEC6AQ6EIG7 209 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 RNF165Q6ZSG1 346 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 LRRC34Q8IZ02 419 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 TAGAPQ8N103 731 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 OR52R1Q8NGF1 315 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 OR9A2Q8NGT5 310 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 OR2T11Q8NH01 316 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 RAB3IL1Q8TBN0 382 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 SPPL2AQ8TCT8 520 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 HGDQ93099 445 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 EXOSC8Q96B26 276 aaKnown RBP9.48□□□□□ -0.89
SHMT2-224ENST00000556737 CHMP6Q96FZ7 201 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 FCRL1Q96LA6 429 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 GATA5Q9BWX5 397 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-224ENST00000556737 TUBB1Q9H4B7 451 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 ANKRA2Q9H9E1 313 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 ZFP64Q9NPA5 681 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 MYNNQ9NPC7 610 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 FGFR1OP2Q9NVK5 253 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 EHD3Q9NZN3 535 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 SPRR3Q9UBC9 169 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 POLR3HQ9Y535 204 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-224ENST00000556737 NPFFR2Q9Y5X5 522 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF780BQ9Y6R6 833 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.48□□□□□ -0.89
SHMT2-224ENST00000556737 ADGRG4Q8IZF6 3080 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 AKAP9Q99996 3911 aa9.48□□□□□ -0.89
SHMT2-224ENST00000556737 ATP6AP2A0A1C7CYW4 349 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 ANKRD33BA6NCL7 494 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 TMEM114B3SHH9 223 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 C19orf84I3L1E1 186 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 AQP7O14520 342 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 TO15178 435 aa9.47□□□□□ -0.89
SHMT2-224ENST00000556737 CRCPO75575 148 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms