RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 KDELC1Q6UW63 502 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 WASH2PQ6VEQ5 465 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 C3P1Q6ZMU1 363 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 RGS9BPQ6ZS82 235 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 PAQR9Q6ZVX9 377 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 CENPUQ71F23 418 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 ERASQ7Z444 233 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 FAM131BQ86XD5 332 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 CCDC36Q8IYA8 594 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 METTL4Q8N3J2 472 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 BANPQ8N9N5 519 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 RELL2Q8NC24 303 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF248Q8NDW4 579 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 STKLD1Q8NE28 680 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF501Q96CX3 271 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 TNFRSF13CQ96RJ3 184 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 CRACR2AQ9BSW2 395 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 RBM24Q9BX46 236 aaKnown RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 NT5C3AQ9H0P0 336 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 ELL3Q9HB65 397 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 FGF22Q9HCT0 170 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 IKZF3Q9UKT9 509 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 FZR1Q9UM11 496 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 CCNB3Q8WWL7 1395 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 SCAPERQ9BY12 1400 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 CNTLNQ9NXG0 1405 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 RRBP1Q9P2E9 1410 aaKnown RBP3.64□□□□□ -1.83
PRPF39-210ENST00000556718 IGKV3D-20A0A0C4DH25 116 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 A0A0J9YVX5 310 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 CLRN2A0PK11 232 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 A8MUI8 341 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 FBP2O00757 339 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 CYB561D2O14569 222 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 MAGEB3O15480 346 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 LANCL1O43813 399 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 OR4F21O95013 312 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 ASNSP08243 561 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 GSTT2P0CG29 244 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 GSTT2BP0CG30 244 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 UQCRBP14927 111 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 CD1DP15813 335 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 TSPAN8P19075 237 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 HNMTP50135 292 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 SGSHP51688 502 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 SLC7A2P52569 658 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 TMEM50BP56557 158 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 ENPP2Q13822 863 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 RFTN1Q14699 578 aaPredicted RBP3.64□□□□□ -1.83
PRPF39-210ENST00000556718 TRIP10Q15642 601 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 CCDC57Q2TAC2 916 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 LRIT3Q3SXY7 679 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 USH1GQ495M9 461 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 NADK2Q4G0N4 442 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 CFAP157Q5JU67 520 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 AGAP7PQ5VUJ5 663 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 RHBDD2Q6NTF9 364 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 NIPAL3Q6P499 406 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 LPCAT2Q7L5N7 544 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 TMEM110Q86TL2 294 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 RPAINQ86UA6 219 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 LUZP1Q86V48 1076 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 OR1K1Q8NGR3 316 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 OR2T6Q8NHC8 308 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 MCHR2Q969V1 340 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 CNRIP1Q96F85 164 aaPredicted RBP3.64□□□□□ -1.83
PRPF39-210ENST00000556718 HPDLQ96IR7 371 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 VSTM2LQ96N03 204 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 LGMNQ99538 433 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 C19orf43Q9BQ61 176 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 ERP44Q9BS26 406 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 GSDMCQ9BYG8 508 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 STRADBQ9C0K7 418 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 KAT8Q9H7Z6 458 aaKnown RBP3.64□□□□□ -1.83
PRPF39-210ENST00000556718 WDR41Q9HAD4 459 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 TRPV5Q9NQA5 729 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 NDE1Q9NXR1 346 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 KLRF1Q9NZS2 232 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 EXTL2Q9UBQ6 330 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.64□□□□□ -1.83
PRPF39-210ENST00000556718 PYGO1Q9Y3Y4 419 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 KIF16BQ96L93 1317 aa3.64□□□□□ -1.83
PRPF39-210ENST00000556718 IBTKQ9P2D0 1353 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 WDR97A6NE52 1622 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 BAZ1BQ9UIG0 1483 aaKnown RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 NPIPA5A0A0B4J1W7 369 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 TRIM49BA6NDI0 452 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 NPIPA5E9PKD4 350 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 NXPH4O95158 308 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 HPRP00739 348 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 ATP6V1C1P21283 382 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 PSMA2P25787 234 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 RPS27AP62979 156 aaKnown RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 SNTB2Q13425 540 aaKnown RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 EXOSC2Q13868 293 aaKnown RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 SYCP1Q15431 976 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 KNOP1Q1ED39 458 aaKnown RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 DCAF4L1Q3SXM0 396 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 ZFP69Q49AA0 526 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 BEND6Q5SZJ8 279 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 ARHGAP11AQ6P4F7 1023 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms