RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 GPR78Q96P69 363 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ATOH8Q96SQ7 321 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 MTERF1Q99551 399 aaKnown RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 PAIP2Q9BPZ3 127 aaKnown RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 TMEM79Q9BSE2 394 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SLC25A23Q9BV35 468 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SHCBP1LQ9BZQ2 653 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 OR51B5Q9H339 312 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SYNPO2LQ9H987 977 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 UNKLQ9H9P5 680 aaKnown RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ZNF160Q9HCG1 818 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 MKKSQ9NPJ1 570 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 PNO1Q9NRX1 252 aaKnown RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 SLC22A11Q9NSA0 550 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 TBCCD1Q9NVR7 557 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 P4HTMQ9NXG6 502 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 XPR1Q9UBH6 696 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 FBXW2Q9UKT8 454 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 GRID1Q9ULK0 1009 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 ZNF490Q9ULM2 529 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-237ENST00000556274 TMCO1Q9UM00 188 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 FIS1Q9Y3D6 152 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 PKD1L2Q7Z442 2459 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 MYO7BQ6PIF6 2116 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 PCSK5Q92824 1860 aa4.37□□□□□ -1.71
ATXN3-237ENST00000556274 NCKAP5O14513 1909 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 EPG5Q9HCE0 2579 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 ESPL1Q14674 2120 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 TRGV11A0A075B6L2 103 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 NSG1A0A0A6YYJ2 146 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 ARHGAP10A1A4S6 786 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 LRIT2A6NDA9 550 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 IDSB3KWA1 339 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 H0YIG0 161 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 H3BMH7 237 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 PYCARD-AS1I3L0S3 204 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 M0QYG6 137 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 AGPSO00116 658 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 RTCAO00442 366 aaKnown RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 CLDN4O14493 209 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 RGS16O15492 202 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 CNOT3O75175 753 aaKnown RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 CDH16O75309 829 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 GLRA3O75311 464 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 KLF7O75840 302 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 OR4F21O95013 312 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 WISP3O95389 354 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 BMP10O95393 424 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 NSA2O95478 260 aaKnown RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 ESRRBO95718 433 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 F10P00742 488 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 UMODP07911 640 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 SERPINA6P08185 405 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 MYZAPP0CAP1 466 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 C8orf89P0DMQ9 161 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 RNH1P13489 461 aaKnown RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 CPA3P15088 417 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 IMPDH1P20839 514 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 ZNF10P21506 573 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 CPN2P22792 545 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 TNFRSF8P28908 595 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 HMOX2P30519 316 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 HNRNPH1P31943 449 aaKnown RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 HPDP32754 393 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 PGDP52209 483 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 AGFG1P52594 562 aaKnown RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 SOX8P57073 446 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 OR4D2P58180 307 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 RPS7P62081 194 aaKnown RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 RPS13P62277 151 aaKnown RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 BTG2P78543 158 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 REEP5Q00765 189 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 RELAQ04206 551 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 STX4Q12846 297 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 IFT88Q13099 833 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 SLAMF1Q13291 335 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 DYRK1AQ13627 763 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 RUNX2Q13950 521 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 FAM53BQ14153 422 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 ZRSR2Q15696 482 aaKnown RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 NSDHLQ15738 373 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 TUBB8Q3ZCM7 444 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 CD300EQ496F6 205 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 LACTB2Q53H82 288 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-237ENST00000556274 CEP85LQ5SZL2 805 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 LIPJQ5W064 366 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 OR4C11Q6IEV9 310 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 ADNP2Q6IQ32 1131 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 WDR93Q6P2C0 686 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 EMBQ6PCB8 327 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 CYP20A1Q6UW02 462 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 SCIMPQ6UWF3 145 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 TIFABQ6ZNK6 161 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 LINC00696Q6ZRV3 163 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 COX15Q7KZN9 410 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 NDUFAF7Q7L592 441 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 PPP1R32Q7Z5V6 425 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 KLHDC8AQ8IYD2 350 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 SIRT6Q8N6T7 355 aa4.36□□□□□ -1.71
ATXN3-237ENST00000556274 EIF1ADQ8N9N8 165 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms