RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PSPHP78330 225 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 BNIP1Q12981 228 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 GAB1Q13480 694 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 TP53BP2Q13625 1128 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 EXOSC7Q15024 291 aaKnown RBP11.58□□□□□ -0.56
SHMT2-221ENST00000555773 ZNHIT3Q15649 155 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-221ENST00000555773 HLA-DQA1Q5Y7H0 255 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 SAXO2Q658L1 398 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 INO80CQ6PI98 192 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-221ENST00000555773 ARPINQ7Z6K5 226 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 ZNF321PQ8N8H1 164 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 CDRT4Q8N9R6 151 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 C17orf47Q8NEP4 570 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 OR8J3Q8NGG0 315 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 C16orf52Q8NHV5 167 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 NUBPLQ8TB37 319 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 MIPOL1Q8TD10 442 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 TP53INP1Q96A56 240 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 GIMAP5Q96F15 307 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 ANKRD27Q96NW4 1050 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 ACTRT3Q9BYD9 372 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 SLC6A13Q9NSD5 602 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 GPATCH2Q9NW75 528 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 SLC25A37Q9NYZ2 338 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 VAPAQ9P0L0 249 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 FAF1Q9UNN5 650 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-221ENST00000555773 CORO2BQ9UQ03 480 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 AP3M1Q9Y2T2 418 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 CROCCQ5TZA2 2017 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 TRBV11-1A0A0K0K1C0 115 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 C2orf92A0A1B0GVN3 265 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 B2RBV5 119 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 AGR2O95994 175 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 DRD5P21918 477 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 MATN1P21941 496 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 MAP3K8P41279 467 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 NUDT2P50583 147 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 TMPRSS3P57727 454 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 CHAF1BQ13112 559 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 DUSP8Q13202 625 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 EBPQ15125 230 aaKnown RBP11.57□□□□□ -0.56
SHMT2-221ENST00000555773 ATP1A1-AS1Q5TC04 95 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 IRAK1BP1Q5VVH5 260 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 NANOGP8Q6NSW7 305 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 MFSD12Q6NUT3 480 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 H3F3CQ6NXT2 135 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 SZRD1Q7Z422 152 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 APLFQ8IW19 511 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-221ENST00000555773 MSRB3Q8IXL7 192 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 ARMC10Q8N2F6 343 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 SLC5A8Q8N695 610 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 SIMC1Q8NDZ2 872 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 OR52N2Q8NGI0 321 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 OR5AK3PQ8NH89 298 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 SNRNP27Q8WVK2 155 aaKnown RBP11.57□□□□□ -0.56
SHMT2-221ENST00000555773 HOXB13Q92826 284 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-221ENST00000555773 VSTM2LQ96N03 204 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 GPATCH1Q9BRR8 931 aaKnown RBP11.57□□□□□ -0.56
SHMT2-221ENST00000555773 LMF2Q9BU23 707 aaKnown RBP11.57□□□□□ -0.56
SHMT2-221ENST00000555773 LHPPQ9H008 270 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 ING2Q9H160 280 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 C1orf21Q9H246 121 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 ANKRA2Q9H9E1 313 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 NANOGQ9H9S0 305 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 IL1RL2Q9HB29 575 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 FOLH1BQ9HBA9 442 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 THUMPD1Q9NXG2 353 aaKnown RBP11.57□□□□□ -0.56
SHMT2-221ENST00000555773 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-221ENST00000555773 ZNF223Q9UK11 482 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-221ENST00000555773 GPR55Q9Y2T6 319 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-221ENST00000555773 PCDHGB3Q9Y5G1 929 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 IGF2RP11717 2491 aa11.57□□□□□ -0.56
SHMT2-221ENST00000555773 ARGFXA6NJG6 315 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 FXYD1O00168 92 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 CDK2AP1O14519 115 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 ACOX3O15254 700 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 ASNA1O43681 348 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 UNC5CO95185 931 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 ALOX5P09917 674 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 GPX2P18283 190 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 CPA2P48052 419 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 MAN2A2P49641 1150 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 RASSF2P50749 326 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 MXRA7P84157 204 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 Q0VFX4 171 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 FADDQ13158 208 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 LASP1Q14847 261 aaKnown RBP11.56□□□□□ -0.56
SHMT2-221ENST00000555773 RGNQ15493 299 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 DEFB109BQ30KR1 87 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 GTDC1Q4AE62 458 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 EXOSC6Q5RKV6 272 aaKnown RBP11.56□□□□□ -0.56
SHMT2-221ENST00000555773 CDC73Q6P1J9 531 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 C8orf82Q6P1X6 216 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-221ENST00000555773 C16orf89Q6UX73 402 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 DNAJC14Q6Y2X3 702 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-221ENST00000555773 RNF130Q86XS8 419 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 C9orf40Q8IXQ3 194 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 LGI4Q8N135 537 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 CLEC4FQ8N1N0 589 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 ADAMTS15Q8TE58 950 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms