RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 TNNI3P19429 210 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 HIST1H1TP22492 207 aaPredicted RBP8.2□□□□□ -1.1
PRKCH-218ENST00000555628 CHMP24386 653 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 GDF5P43026 501 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 DIO3P55073 304 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 CLDN15P56746 228 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 EEF1A1P68104 462 aaKnown RBP8.2□□□□□ -1.1
PRKCH-218ENST00000555628 PLIN5Q00G26 463 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 CRYMQ14894 314 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 ETFDHQ16134 617 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 C6orf52Q5T4I8 152 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 SEL1L2Q5TEA6 688 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 EEF1A1P5Q5VTE0 462 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 RNF111Q6ZNA4 994 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 ST13P4Q8IZP2 240 aaPredicted RBP8.2□□□□□ -1.1
PRKCH-218ENST00000555628 ZNF615Q8N8J6 731 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 WDSUB1Q8N9V3 476 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 LILRB1Q8NHL6 650 aaPredicted RBP8.2□□□□□ -1.1
PRKCH-218ENST00000555628 TMEM171Q8WVE6 324 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 ANKRD7Q92527 254 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 HGDQ93099 445 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 RHBDF1Q96CC6 855 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 DGAT2Q96PD7 388 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 TMEM79Q9BSE2 394 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 ZNF717Q9BY31 904 aaPredicted RBP8.2□□□□□ -1.1
PRKCH-218ENST00000555628 OPN3Q9H1Y3 402 aaPredicted RBP8.2□□□□□ -1.1
PRKCH-218ENST00000555628 XAB2Q9HCS7 855 aaKnown RBP8.2□□□□□ -1.1
PRKCH-218ENST00000555628 IARS2Q9NSE4 1012 aaKnown RBP8.2□□□□□ -1.1
PRKCH-218ENST00000555628 TMEM160Q9NX00 188 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 DLGAP4Q9Y2H0 992 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 ZKSCAN5Q9Y2L8 839 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 MAD1L1Q9Y6D9 718 aa8.2□□□□□ -1.1
PRKCH-218ENST00000555628 PLCE1Q9P212 2302 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 FAM95CA0A1B0GW59 222 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 A0A1W2PS29 197 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 NPEPPSL1A6NEC2 478 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 WASHC1A8K0Z3 465 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 A8MV72 311 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 H0Y3Z8 333 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 TP53I11O14683 189 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 GSC2O15499 205 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 TAPBPO15533 448 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 EIF4EBP3O60516 100 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 PRKRAO75569 313 aaKnown RBP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 SIX3O95343 332 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 WISP3O95389 354 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 ABCB1P08183 1280 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 RHOXF2BP0C7M4 288 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 CD8BP10966 210 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 ALOX15P16050 662 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 ABCD3P28288 659 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 GALNSP34059 522 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 ADMP35318 185 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 GGT5P36269 586 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 CASP2P42575 452 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 HNMTP50135 292 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 HNRNPH2P55795 449 aaKnown RBP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 B3GALT5-AS1P59052 145 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 VEZF1Q14119 521 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 C18orf63Q68DL7 685 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 SLC29A4Q7RTT9 530 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 MILR1Q7Z6M3 343 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 C17orf47Q8NEP4 570 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 ZNF473Q8WTR7 871 aaKnown RBP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 RNF138Q8WVD3 245 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 ROBO4Q8WZ75 1007 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 CCT6BQ92526 530 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 ART5Q96L15 291 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 TBCDQ9BTW9 1192 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 TRIM54Q9BYV2 358 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 SLCO5A1Q9H2Y9 848 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 COPS7BQ9H9Q2 264 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 SERHLQ9NQF3 203 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 YAE1D1Q9NRH1 226 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.19□□□□□ -1.1
PRKCH-218ENST00000555628 ELOVL5Q9NYP7 299 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 GPRC5BQ9NZH0 403 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 OARD1Q9Y530 152 aa8.19□□□□□ -1.1
PRKCH-218ENST00000555628 C16orf97H3BN30 126 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 WDR47O94967 919 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 AIFM1O95831 613 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 IGHV4-39P01824 125 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 F13BP05160 661 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 SOD3P08294 240 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 CT62P0C5K7 136 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 S1PR1P21453 382 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 HPDP32754 393 aaPredicted RBP8.18□□□□□ -1.1
PRKCH-218ENST00000555628 ACVR1BP36896 505 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 MASP1P48740 699 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 STARP49675 285 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 SRSF2Q01130 221 aaKnown RBP8.18□□□□□ -1.1
PRKCH-218ENST00000555628 TNFRSF17Q02223 184 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 KIF5AQ12840 1032 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 GPS1Q13098 491 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 BIKQ13323 160 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 DOC2AQ14183 400 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 ZNF267Q14586 743 aaPredicted RBP8.18□□□□□ -1.1
PRKCH-218ENST00000555628 TRIP13Q15645 432 aaPredicted RBP8.18□□□□□ -1.1
PRKCH-218ENST00000555628 BEX5Q5H9J7 111 aa8.18□□□□□ -1.1
PRKCH-218ENST00000555628 MRM1Q6IN84 353 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms