RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PI15O43692 258 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 FRAT2O75474 233 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-213ENST00000554776 STK17BO94768 372 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 GSTA1P08263 222 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 GSTT2P0CG29 244 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 GSTT2BP0CG30 244 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 TSPY4P0CV99 314 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 TSPY10P0CW01 314 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 FOSL2P15408 326 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 CALML3P27482 149 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 DLSTP36957 453 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 ETV5P41161 510 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 SLC1A4P43007 532 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 HTR5AP47898 357 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 NUMBP49757 651 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 HAND2P61296 217 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 TRA2BP62995 288 aaKnown RBP2.52□□□□□ -2.01
SCFD1-213ENST00000554776 NOP14P78316 857 aaKnown RBP2.52□□□□□ -2.01
SCFD1-213ENST00000554776 SRPXP78539 464 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 NUCB2P80303 420 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 HSF2Q03933 536 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 SCGB2A2Q13296 93 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 FASTKQ14296 549 aaKnown RBP2.52□□□□□ -2.01
SCFD1-213ENST00000554776 TRIP10Q15642 601 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 ZSWIM7Q19AV6 140 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 PARP6Q2NL67 630 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 TMEM44Q2T9K0 475 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 LRIT3Q3SXY7 679 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 POM121L1PQ3SYA9 428 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 SLC39A4Q6P5W5 647 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 AFTPHQ6ULP2 937 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 Q7L0L9 218 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 ARMCX2Q7L311 632 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 GOLGA7Q7Z5G4 137 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 MISPQ8IVT2 679 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 CENPSQ8N2Z9 138 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 CERS5Q8N5B7 392 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 TEX9Q8N6V9 391 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 SAMD12Q8N8I0 201 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF491Q8N8L2 437 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 COLGALT1Q8NBJ5 622 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 OR4Q3Q8NH05 313 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 NCLNQ969V3 563 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 SYAP1Q96A49 352 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-213ENST00000554776 BIRC7Q96CA5 298 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 SLC45A3Q96JT2 553 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 HSD17B14Q9BPX1 270 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 CHCHD5Q9BSY4 110 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 THUMPD2Q9BTF0 503 aaKnown RBP2.52□□□□□ -2.01
SCFD1-213ENST00000554776 LRRC61Q9BV99 259 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 RAB11FIP5Q9BXF6 653 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 KAT8Q9H7Z6 458 aaKnown RBP2.52□□□□□ -2.01
SCFD1-213ENST00000554776 SLC35D1Q9NTN3 355 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 SEC14L4Q9UDX3 406 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 CPQQ9Y646 472 aa2.52□□□□□ -2.01
SCFD1-213ENST00000554776 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.52□□□□□ -2.01
SCFD1-213ENST00000554776 A0A087WZY1 265 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 A0A1W2PPR1 153 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 ZSCAN5CA6NGD5 496 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 WASHC1A8K0Z3 465 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 WASH3PC4AMC7 463 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 SDHDO14521 159 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 TRAFD1O14545 582 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 CYB561D2O14569 222 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 ARPC1BO15143 372 aaKnown RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 CHADO15335 359 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 PEX11AO75192 247 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 SEMA4FO95754 770 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 ECDO95905 644 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 KRT13P13646 458 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 GP9P14770 177 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 PTPN6P29350 595 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 ADRA1AP35348 466 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 SAA4P35542 130 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 HMGCLP35914 325 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 CAPGP40121 348 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 MDH1P40925 334 aaKnown RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 GSK3BP49841 420 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 SLC7A2P52569 658 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 RIDAP52758 137 aaKnown RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 VCPP55072 806 aaKnown RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 OVGP1Q12889 678 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 PDZK1IP1Q13113 114 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 EXOSC2Q13868 293 aaKnown RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 BEND6Q5SZJ8 279 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 SEL1L2Q5TEA6 688 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 AGAP7PQ5VUJ5 663 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 FAM219BQ5XKK7 198 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 RHBDD2Q6NTF9 364 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 PAQR6Q6TCH4 344 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 APOOLQ6UXV4 268 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 WASH2PQ6VEQ5 465 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 LPCAT2Q7L5N7 544 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 TIPARPQ7Z3E1 657 aaKnown RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 P4HA3Q7Z4N8 544 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 RNF130Q86XS8 419 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF573Q86YE8 665 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 GRAMD2AQ8IUY3 354 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 HSCBQ8IWL3 235 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 LMNTD2Q8IXW0 634 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms