RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 HIST1H2AGP0C0S8 130 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 FAM157CP0CG43 387 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 TMIGD3P0DMS9 266 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 CDH1P12830 882 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 HIST1H2ADP20671 130 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 NMBRP28336 390 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 SERPINB3P29508 390 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 PPP2R1BP30154 601 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 RPL22P35268 128 aaKnown RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 HNF4AP41235 474 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 RPL21P46778 160 aaKnown RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 DIO3P55073 304 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ATP5J2P56134 94 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 TBPL1P62380 186 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 KCNJ2P63252 427 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 CCZ1BP86790 482 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 CCZ1P86791 482 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ROM1Q03395 351 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 RUNX1T1Q06455 604 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 CRYZQ08257 329 aaKnown RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ASPHQ12797 758 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 SLC13A2Q13183 592 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 GAB1Q13480 694 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 RCN2Q14257 317 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 CAPRIN1Q14444 709 aaKnown RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF791Q3KP31 576 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 NHSL2Q5HYW2 709 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 LUZP2Q86TE4 346 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF595Q8IYB9 648 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 DND1Q8IYX4 353 aaKnown RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 SLC15A4Q8N697 577 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF441Q8N8Z8 693 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 TC2NQ8N9U0 490 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 TRPV3Q8NET8 790 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 OR14A16Q8NHC5 309 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 GABPB2Q8TAK5 448 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ZPLD1Q8TCW7 415 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 PAQR8Q8TEZ7 354 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 PTPMT1Q8WUK0 201 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 TMEM171Q8WVE6 324 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 PIK3IP1Q96FE7 263 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 SNF8Q96H20 258 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 WDYHV1Q96HA8 205 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 FAR2Q96K12 515 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 HIST1H2AHQ96KK5 128 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ZFP3Q96NJ6 502 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 WFIKKN1Q96NZ8 548 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 HIST1H2AJQ99878 128 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 H2AFJQ9BTM1 129 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 ALOXE3Q9BYJ1 711 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 REG4Q9BYZ8 158 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 OR8D2Q9GZM6 311 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 IL22Q9GZX6 179 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 KLHL31Q9H511 634 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 CXorf56Q9H5V9 222 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 PARVBQ9HBI1 364 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 PROK2Q9HC23 129 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 BFARQ9NZS9 450 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 CAMK2AQ9UQM7 478 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 SH2B3Q9UQQ2 575 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 MRPS33Q9Y291 106 aaKnown RBP4.39□□□□□ -1.71
ATXN3-229ENST00000554672 DHRS7Q9Y394 339 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 CLDN16Q9Y5I7 305 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 IKBKGQ9Y6K9 419 aa4.39□□□□□ -1.71
ATXN3-229ENST00000554672 LRRC3CA6NJW4 275 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 A8MV72 311 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 C17orf105B2RV13 164 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 GOLGA8KD6RF30 607 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 GOLGA8TH3BQL2 631 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 TRIM3O75382 744 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 TOX4O94842 621 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 ACSL3O95573 720 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 C8GP07360 202 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 APRTP07741 180 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 TPM1P09493 284 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 OGNP20774 298 aaKnown RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 CRYGSP22914 178 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 GDF1P27539 372 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 IDUAP35475 653 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 CDK9P50750 372 aaKnown RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 RAB38P57729 211 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 STXBP1P61764 594 aaKnown RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 BTN3A2P78410 334 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 COL10A1Q03692 680 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 STX4Q12846 297 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 FOXF2Q12947 444 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 CUL1Q13616 776 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 RUNX2Q13950 521 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 SERTAD2Q14140 314 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 RCAN2Q14206 197 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 CSHL1Q14406 222 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 EFTUD2Q15029 972 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 ETFDHQ16134 617 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 CLEC12BQ2HXU8 276 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 KRTAP24-1Q3LI83 254 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 C10orf62Q5T681 223 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-229ENST00000554672 DUPD1Q68J44 220 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 LRRC8EQ6NSJ5 796 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 NEPROQ6NW34 567 aa4.38□□□□□ -1.71
ATXN3-229ENST00000554672 AADACL2Q6P093 401 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms