RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 MLKLQ8NB16 471 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 RNF149Q8NC42 400 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 KBTBD8Q8NFY9 601 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 OR9K2Q8NGE7 335 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 OR6M1Q8NGM8 313 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 OR1J1Q8NGS3 322 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 OR13C5Q8NGS8 318 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 GOLGA5Q8TBA6 731 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 KIAA1143Q96AT1 154 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 BPIFA2Q96DR5 249 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 C18orf12Q96KH6 178 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 RPRD1AQ96P16 312 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 NEDD4LQ96PU5 975 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 AGPAT1Q99943 283 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 PSD2Q9BQI7 771 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 MTG1Q9BT17 334 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 TMEM43Q9BTV4 400 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 LRRCC1Q9C099 1032 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 THAP2Q9H0W7 228 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 STMN4Q9H169 189 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 ZDHHC6Q9H6R6 413 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 EXO5Q9H790 373 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 ZNF665Q9H7R5 613 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 KAT8Q9H7Z6 458 aaKnown RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 FN3KRPQ9HA64 309 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 ELOVL3Q9HB03 270 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 C3orf14Q9HBI5 128 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 RAB18Q9NP72 206 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 CHST11Q9NPF2 352 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 ECHDC1Q9NTX5 307 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 C1orf123Q9NWV4 160 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 SPHK1Q9NYA1 384 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 DBF4Q9UBU7 674 aaPredicted RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 SUN2Q9UH99 717 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 PILRAQ9UKJ1 303 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 STUB1Q9UNE7 303 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 IFT52Q9Y366 437 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 MRPS2Q9Y399 296 aaKnown RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 OR1A2Q9Y585 309 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 FKBP7Q9Y680 259 aa1.99□□□□□ -2.09
SRP54-204ENST00000553923 PRRC2AP48634 2157 aaKnown RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 TDRD15B5MCY1 1934 aaKnown RBP1.99□□□□□ -2.09
SRP54-204ENST00000553923 NPC1L1Q9UHC9 1359 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 TEX13DA0A0J9YY54 714 aaPredicted RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 HEATR9A2RTY3 570 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 C5orf60A6NFR6 353 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ASB14A6NK59 587 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 OR52A4PA6NMU1 304 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 YJEFN3A6XGL0 299 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 A8MVM7 634 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ZNF732B4DXR9 585 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 SUPT3HB4E1H0 165 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 H3BMH7 237 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 M0QX08 132 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 FOXE1O00358 373 aaPredicted RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 ABCD4O14678 606 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 KLF11O14901 512 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ARPC3O15145 178 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CASC3O15234 703 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 POLR2DO15514 142 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 MLNRO43193 412 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 RNF13O43567 381 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 PI15O43692 258 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 OR1F1O43749 312 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ECE2O60344 883 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CACNG3O60359 315 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 NEMFO60524 1076 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 JAK2O60674 1132 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 RNASEH1O60930 286 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 ECI2O75521 394 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 KRT33AO76009 404 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 NEBLO76041 1014 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 MT-ND2P03891 347 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 VTNP04004 478 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 SERPINF2P08697 491 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 PABPC4LP0CB38 370 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 IGHV4-38-2P0DP08 117 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 TROVE2P10155 538 aaKnown RBP eCLIP1.98□□□□□ -2.09
SRP54-204ENST00000553923 KRT3P12035 628 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 NCK1P16333 377 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CYP3A5P20815 502 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CTNNA2P26232 953 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 HTR2AP28223 471 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CYLC1P35663 651 aaPredicted RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 GRIA1P42261 906 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 HTR5AP47898 357 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 SLC6A8P48029 635 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 RAG2P55895 527 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 OSTNP61366 133 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 RPS8P62241 208 aaKnown RBP1.98□□□□□ -2.09
SRP54-204ENST00000553923 SP3Q02447 781 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 SPAG1Q07617 926 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 HSPA14Q0VDF9 509 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 BST1Q10588 318 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 MFAP5Q13361 173 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ENPP2Q13822 863 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 CEACAM7Q14002 265 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 ARHGAP19Q14CB8 494 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 DPYSL2Q16555 572 aa1.98□□□□□ -2.09
SRP54-204ENST00000553923 TATDN3Q17R31 274 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms