RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 RPL38P63173 70 aaKnown RBP7.73□□□□□ -1.17
PSEN1-209ENST00000553855 RBPJQ06330 500 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 IGFBP7Q16270 282 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 EXOSC6Q5RKV6 272 aaKnown RBP7.73□□□□□ -1.17
PSEN1-209ENST00000553855 SPINK14Q6IE38 97 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 IL20RBQ6UXL0 311 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 RNF165Q6ZSG1 346 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 R3HCC1LQ7Z5L2 792 aaKnown RBP7.73□□□□□ -1.17
PSEN1-209ENST00000553855 FAM9CQ8IZT9 166 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 SLC15A4Q8N697 577 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 Q8NA96 180 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 FNDC5Q8NAU1 212 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 ZFP28Q8NHY6 868 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 GRHL3Q8TE85 626 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 ZNF721Q8TF20 911 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 DYDC1Q8WWB3 177 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 MIB2Q96AX9 1013 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 TUBGCP3Q96CW5 907 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 SGCZQ96LD1 299 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 PRPF18Q99633 342 aaKnown RBP7.73□□□□□ -1.17
PSEN1-209ENST00000553855 CXorf21Q9HAI6 301 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 TMBIM4Q9HC24 238 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 MYNNQ9NPC7 610 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 ASF1BQ9NVP2 202 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 EIF3LQ9Y262 564 aaKnown RBP7.73□□□□□ -1.17
PSEN1-209ENST00000553855 RAP2CQ9Y3L5 183 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 CSAG2Q9Y5P2 127 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 DNAJC15Q9Y5T4 150 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 CCDC88CQ9P219 2028 aa7.73□□□□□ -1.17
PSEN1-209ENST00000553855 PCSK5Q92824 1860 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 COL6A6A6NMZ7 2263 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 WASHC1A8K0Z3 465 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 SHISA8B8ZZ34 492 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 TP53I11O14683 189 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 PEX11AO75192 247 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 COQ9O75208 318 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 DEAF1O75398 565 aaPredicted RBP7.72□□□□□ -1.17
PSEN1-209ENST00000553855 SLITRK5O94991 958 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 ATP1B1P05026 303 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 BGNP21810 368 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 KRT20P35900 424 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 HPCAL1P37235 193 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 RPL14P50914 215 aaKnown RBP7.72□□□□□ -1.17
PSEN1-209ENST00000553855 NCBP2P52298 156 aaKnown RBP eCLIP7.72□□□□□ -1.17
PSEN1-209ENST00000553855 SLC18A1P54219 525 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 CASP6P55212 293 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 DCAF7P61962 342 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 ALDH6A1Q02252 535 aaKnown RBP7.72□□□□□ -1.17
PSEN1-209ENST00000553855 PLGLB1Q02325 96 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 MPEG1Q2M385 716 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 TNFAIP8L3Q5GJ75 292 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 FHL5Q5TD97 284 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 RTL4Q6ZR62 310 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 GALNTL5Q7Z4T8 443 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 TICAM1Q8IUC6 712 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 MRPL41Q8IXM3 137 aaKnown RBP7.72□□□□□ -1.17
PSEN1-209ENST00000553855 ARMC10Q8N2F6 343 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 POGLUT1Q8NBL1 392 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 RAB3IL1Q8TBN0 382 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 UBASH3BQ8TF42 649 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 FAR1Q8WVX9 515 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 TP53INP1Q96A56 240 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 PPCDCQ96CD2 204 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 ERP27Q96DN0 273 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 C19orf60Q96EN9 201 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 RASL10BQ96S79 203 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 OR10A5Q9H207 317 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 VIPAS39Q9H9C1 493 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 SLC35C2Q9NQQ7 365 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 CRIM1Q9NZV1 1036 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 SH3BP4Q9P0V3 963 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 CES1P1Q9UKY3 287 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 MAPRE3Q9UPY8 281 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 CLDN16Q9Y5I7 305 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 LOC400499M0QZD8 3231 aa7.72□□□□□ -1.17
PSEN1-209ENST00000553855 ANKUB1A6NFN9 424 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 HMGB1P1B2RPK0 211 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 TCP11X1B4DZS4 312 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 NPIPB8E9PQR5 432 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 SLCO1B7G3V0H7 640 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 PYCARD-AS1I3L0S3 204 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ACOT7O00154 380 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 RGS13O14921 159 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 LSM1O15116 133 aaKnown RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 AKAP10O43572 662 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 PEX1O43933 1283 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 NME2P1O60361 137 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 LYPLA1O75608 230 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 IGKV3-11P04433 115 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 PRPS2P11908 318 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF24P17028 368 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 GNLYP22749 145 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 NTF4P34130 210 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 SOX3P41225 446 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 MASP1P48740 699 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 NR0B1P51843 470 aaKnown RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 SLC37A1P57057 533 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 PSPHP78330 225 aa7.71□□□□□ -1.18
PSEN1-209ENST00000553855 RAE1P78406 368 aaKnown RBP7.71□□□□□ -1.18
PSEN1-209ENST00000553855 FUT7Q11130 342 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms