RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 SPPL2AQ8TCT8 520 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.86□□□□□ -0.51
CACNB3-223ENST00000552480 SDCCAG3Q96C92 435 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 SLC35A4Q96G79 324 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 RBM18Q96H35 190 aaKnown RBP11.86□□□□□ -0.51
CACNB3-223ENST00000552480 ZNF578Q96N58 590 aaPredicted RBP11.86□□□□□ -0.51
CACNB3-223ENST00000552480 OR6C1Q96RD1 312 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 TREX2Q9BQ50 279 aaPredicted RBP11.86□□□□□ -0.51
CACNB3-223ENST00000552480 SPATA5L1Q9BVQ7 753 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 YIPF2Q9BWQ6 316 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 PIGUQ9H490 435 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 RUBCNLQ9H714 662 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 CXorf21Q9HAI6 301 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 ADAP2Q9NPF8 381 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 FTSJ1Q9UET6 329 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 RARRES3Q9UL19 164 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 KCNE3Q9Y6H6 103 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 AK5Q9Y6K8 562 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 NUP210LQ5VU65 1888 aa11.86□□□□□ -0.51
CACNB3-223ENST00000552480 KNL1Q8NG31 2342 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 ARID1BQ8NFD5 2236 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-223ENST00000552480 C7orf72A4D263 438 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 PRR33A8MZF0 331 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 EI24O14681 340 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 SOX30O94993 753 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 H6PDO95479 791 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 CBX7O95931 251 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 HPRP00739 348 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 ALOX5P09917 674 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 ZNF806P0C7X5 589 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 ITGA2P17301 1181 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 MAOAP21397 527 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 S1PR1P21453 382 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 KCNJ5P48544 419 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 EXOSC7Q15024 291 aaKnown RBP11.85□□□□□ -0.51
CACNB3-223ENST00000552480 ARHGAP11BQ3KRB8 267 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 PHF19Q5T6S3 580 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 BPHLQ86WA6 291 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-223ENST00000552480 HIPK1Q86Z02 1210 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 ZDHHC13Q8IUH4 622 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 SMYD1Q8NB12 490 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 SLC16A11Q8NCK7 471 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 SIMC1Q8NDZ2 872 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 RHBDD1Q8TEB9 315 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 SLC9A6Q92581 669 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 HOXB13Q92826 284 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-223ENST00000552480 CDS1Q92903 461 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 RIT1Q92963 219 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 COL21A1Q96P44 957 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 ZNF347Q96SE7 839 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 STACQ99469 402 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 OSBPL11Q9BXB4 747 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 SLC7A5P2Q9GIP4 190 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 MKKSQ9NPJ1 570 aaPredicted RBP11.85□□□□□ -0.51
CACNB3-223ENST00000552480 NECTIN3Q9NQS3 549 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 DUSP22Q9NRW4 184 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 VNN3Q9NY84 501 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 SEC14L3Q9UDX4 400 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 PCDHGB3Q9Y5G1 929 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 AP4B1Q9Y6B7 739 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 DSPPQ9NZW4 1301 aa11.85□□□□□ -0.51
CACNB3-223ENST00000552480 IGKV3D-11A0A0A0MRZ8 115 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 A8MVJ9 347 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 G3V2T6 193 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 DENRO43583 198 aaKnown RBP11.84□□□□□ -0.51
CACNB3-223ENST00000552480 E2F6O75461 281 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 JRKO75564 520 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 DNAJB5O75953 348 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 RECKO95980 971 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 AK1P00568 194 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 FESP07332 822 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 HBQ1P09105 142 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 TNFRSF1BP20333 461 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 DNAJA1P31689 397 aaKnown RBP11.84□□□□□ -0.51
CACNB3-223ENST00000552480 DCTP40126 519 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 MAP3K8P41279 467 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 ALDH3A2P51648 485 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 HPCAP84074 193 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 KCNC4Q03721 635 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 ZFP36L1Q07352 338 aaKnown RBP11.84□□□□□ -0.51
CACNB3-223ENST00000552480 ZNF155Q12901 538 aaPredicted RBP11.84□□□□□ -0.51
CACNB3-223ENST00000552480 DUSP8Q13202 625 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 DAG1Q14118 895 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 DUSP5Q16690 384 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 C1orf189Q5VU69 101 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 SHQ1Q6PI26 577 aaKnown RBP11.84□□□□□ -0.51
CACNB3-223ENST00000552480 TBPL2Q6SJ96 375 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 WDR53Q7Z5U6 358 aaPredicted RBP11.84□□□□□ -0.51
CACNB3-223ENST00000552480 TSEN54Q7Z6J9 526 aaKnown RBP11.84□□□□□ -0.51
CACNB3-223ENST00000552480 CHDHQ8NE62 594 aaPredicted RBP11.84□□□□□ -0.51
CACNB3-223ENST00000552480 GPR32P1Q8NGA4 272 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 OR52R1Q8NGF1 315 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 DOK4Q8TEW6 326 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 APOBEC4Q8WW27 367 aaKnown RBP11.84□□□□□ -0.51
CACNB3-223ENST00000552480 PROX1Q92786 737 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 ZNF354BQ96LW1 612 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 PTCHD1Q96NR3 888 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 EPYCQ99645 322 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 GABARAPL1Q9H0R8 117 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 SLC38A1Q9H2H9 487 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms