RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 ERVPABLB-1P60509 514 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 ERVK-16P61578 105 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 GLRA4Q5JXX5 417 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 TPGS2Q68CL5 300 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 OR4A47Q6IF82 309 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 SLC8B1Q6J4K2 584 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 MFSD12Q6NUT3 480 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 PLA2G4DQ86XP0 818 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 CACUL1Q86Y37 369 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 TBC1D10CQ8IV04 446 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 EFCAB13Q8IY85 973 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 CMTM8Q8IZV2 173 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 GUF1Q8N442 669 aaKnown RBP2.86□□□□□ -1.95
CNOT2-216ENST00000548939 RNF149Q8NC42 400 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 PDCD6IPQ8WUM4 868 aaKnown RBP2.86□□□□□ -1.95
CNOT2-216ENST00000548939 LPGAT1Q92604 370 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 SEPHS2Q99611 448 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 CCDC28BQ9BUN5 200 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 MAK16Q9BXY0 300 aaKnown RBP2.86□□□□□ -1.95
CNOT2-216ENST00000548939 ABCG4Q9H172 646 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 MINDY3Q9H8M7 445 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 FBXL5Q9UKA1 691 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 WDR83OSQ9Y284 106 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 NAALAD2Q9Y3Q0 740 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 ZFC3H1O60293 1989 aaKnown RBP2.86□□□□□ -1.95
CNOT2-216ENST00000548939 APCP25054 2843 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 ATRQ13535 2644 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 HIVEP3Q5T1R4 2406 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 PTPRDP23468 1912 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 IGHV3-20A0A0C4DH32 117 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 H0Y9J4 135 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 VILLO15195 856 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 CYTH3O43739 400 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 HMMRO75330 724 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 CSO75390 466 aaKnown RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 CENPBP07199 599 aaPredicted RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 OR4Q2P0C623 313 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 CALM1P0DP23 149 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 CALM2P0DP24 149 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 CALM3P0DP25 149 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 ATP6V1B1P15313 513 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 MARCKSP29966 332 aaPredicted RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 NMT1P30419 496 aaKnown RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 AXLP30530 894 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 NDST2P52849 883 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 CDH13P55290 713 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 ARF3P61204 181 aaPredicted RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 ARF1P84077 181 aaKnown RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 LAMTOR4Q0VGL1 99 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 SRSF9Q13242 221 aaKnown RBP eCLIP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 SRSF6Q13247 344 aaKnown RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 KIAA0141Q14154 515 aaPredicted RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 UGCGQ16739 394 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 Q1RN00 199 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 TRMT11Q7Z4G4 463 aaKnown RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 DNAJB7Q7Z6W7 309 aaPredicted RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 ITIH5Q86UX2 942 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 ZNF595Q8IYB9 648 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 PRPF31Q8WWY3 499 aaKnown RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 METTL21AQ8WXB1 218 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 PIK3R3Q92569 461 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 PSMG2Q969U7 264 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 SPACA9Q96E40 222 aaPredicted RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 FAM71F1Q96KD3 344 aaPredicted RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 OCR1Q9BZK8 76 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 LINC00597Q9H2U6 94 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 TBC1D22BQ9NU19 505 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 ANAPC2Q9UJX6 822 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 SATB2Q9UPW6 733 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 MYO16Q9Y6X6 1858 aa2.85□□□□□ -1.95
CNOT2-216ENST00000548939 ZNF638Q14966 1978 aaKnown RBP2.85□□□□□ -1.95
CNOT2-216ENST00000548939 NUP210Q8TEM1 1887 aaPredicted RBP2.84□□□□□ -1.95
CNOT2-216ENST00000548939 LOC100509620A0A075B734 347 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 LOC102723996A0A087X1L8 192 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 A0A1W2PQ72 361 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 ERICH2A1L162 156 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 AP3D1O14617 1153 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 PTGESO14684 152 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 ADAMDEC1O15204 470 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 B4GALT5O43286 388 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 TNFSF15O95150 251 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 MGMTP16455 207 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 ARF4P18085 180 aaPredicted RBP2.84□□□□□ -1.95
CNOT2-216ENST00000548939 OPRD1P41143 372 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 RPL10AP62906 217 aaKnown RBP2.84□□□□□ -1.95
CNOT2-216ENST00000548939 ILKQ13418 452 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 VEZF1Q14119 521 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 TGIF1Q15583 401 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 VASH2Q86V25 355 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 ARL14Q8N4G2 192 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 ATAD1Q8NBU5 361 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 APPL2Q8NEU8 664 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 MRPS31Q92665 395 aaKnown RBP2.84□□□□□ -1.95
CNOT2-216ENST00000548939 CCDC51Q96ER9 411 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 JPH2Q9BR39 696 aaPredicted RBP2.84□□□□□ -1.95
CNOT2-216ENST00000548939 RBM24Q9BX46 236 aaKnown RBP2.84□□□□□ -1.95
CNOT2-216ENST00000548939 CXCL16Q9H2A7 254 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 SYNDIG1Q9H7V2 258 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 Q9H8V8 135 aa2.84□□□□□ -1.95
CNOT2-216ENST00000548939 ASCL3Q9NQ33 180 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms