RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 NT5CQ8TCD5 201 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 FAM162AQ96A26 154 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 MS4A6EQ96DS6 147 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 C9orf16Q9BUW7 83 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 SORBS1Q9BX66 1292 aaKnown RBP18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 AICDAQ9GZX7 198 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 BATF3Q9NR55 127 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 DCHS2Q6V1P9 2916 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 CLCN2P51788 898 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 STXBP1P61764 594 aaKnown RBP18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 HBA1P69905 142 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 FADDQ13158 208 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 MED21Q13503 144 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 ATP1A4Q13733 1029 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 MLC1Q15049 377 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 PLCL1Q15111 1095 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 RGNQ15493 299 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 TMTC4Q5T4D3 741 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 MRM1Q6IN84 353 aaKnown RBP18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 ABHD17CQ6PCB6 329 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 Q6ZS92 163 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 KMT5CQ86Y97 462 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 PLD3Q8IV08 490 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 SLC38A9Q8NBW4 561 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 OR5P2Q8WZ92 322 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 TM9SF4Q92544 642 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 ZNF597Q96LX8 424 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 KCNC2Q96PR1 638 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 BDH2Q9BUT1 245 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 CHID1Q9BWS9 393 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 SLC6A16Q9GZN6 736 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 SEMA6AQ9H2E6 1030 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 ACTR10Q9NZ32 417 aa18.68■□□□□ 0.58
CTDSP2-204ENST00000548823 FER1L5A0AVI2 2057 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 A0A1B0GUH1 482 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 C2orf74A8MZ97 194 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 RTCAO00442 366 aaKnown RBP18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 TMPRSS11DO60235 418 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 DEAF1O75398 565 aaPredicted RBP18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 C6orf47O95873 294 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 UGT2B7P16662 529 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 SSR2P43308 183 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 RBBP4Q09028 425 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 FAM69BQ5VUD6 431 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 ZBTB49Q6ZSB9 765 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 PTOV1Q86YD1 416 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 ZADH2Q8N4Q0 377 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 OR52N2Q8NGI0 321 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 OR8K5Q8NH50 307 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 RNF145Q96MT1 663 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 FAIM2Q9BWQ8 316 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 COQ10BQ9H8M1 238 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 PRDM7Q9NQW5 492 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 ACSS1Q9NUB1 689 aaPredicted RBP18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 ZNF639Q9UID6 485 aa18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 SAMD4AQ9UPU9 718 aaKnown RBP18.67■□□□□ 0.58
CTDSP2-204ENST00000548823 PCSK5Q92824 1860 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 MEN1O00255 615 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 KRT75O95678 551 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 UQCRC2P22695 453 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 ARL4DP49703 201 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 PPP1CAP62136 330 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 MRPS35P82673 323 aaKnown RBP18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 FOLH1Q04609 750 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 GAB1Q13480 694 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 MYBPC3Q14896 1274 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 SLC9A5Q14940 896 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 ADRM1Q16186 407 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 PRSS53Q2L4Q9 553 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 TOR1AIP1Q5JTV8 583 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 LCN10Q6JVE6 187 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 TRIM40Q6P9F5 258 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 FAM20CQ8IXL6 584 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 MARVELD2Q8N4S9 558 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 PSMA8Q8TAA3 256 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 FAM110BQ8TC76 370 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 GAL3ST3Q96A11 431 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 TM4SF19Q96DZ7 209 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 SEPHS2Q99611 448 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 ROGDIQ9GZN7 287 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 NEUROD4Q9HD90 331 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 RPS6KA6Q9UK32 745 aa18.66■□□□□ 0.58
CTDSP2-204ENST00000548823 CLOCKO15516 846 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 STSP08842 583 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 FAM58BPP0C7Q3 252 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 EDN3P14138 238 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 HIST1H1TP22492 207 aaPredicted RBP18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 ATP5A1P25705 553 aaKnown RBP18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 SOX11P35716 441 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 MVDP53602 400 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 HSD11B2P80365 405 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 RGS1Q08116 209 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 FIGLAQ6QHK4 219 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 FJX1Q86VR8 437 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 RAB43Q86YS6 212 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 D2HGDHQ8N465 521 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 NCLNQ969V3 563 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 CIDECQ96AQ7 238 aaPredicted RBP18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 SLC47A1Q96FL8 570 aa18.65■□□□□ 0.58
CTDSP2-204ENST00000548823 CIB1Q99828 191 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms