RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CD8BP10966 210 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 NFYAP23511 347 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-212ENST00000546744 MAGEA11P43364 429 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 GPR143P51810 404 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 C3orf38Q5JPI3 329 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 SDHAF4Q5VUM1 108 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 SIGIRRQ6IA17 410 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 DCUN1D3Q8IWE4 304 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF587Q96SQ5 575 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-212ENST00000546744 NMNAT1Q9HAN9 279 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-212ENST00000546744 UFSP2Q9NUQ7 469 aa12.2□□□□□ -0.46
PTCH1-212ENST00000546744 LOC105369274A0A096LPK9 316 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 hCG_1807616A0A1W2PRN6 198 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 SMIM30A4D0T7 59 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 CDHR4A6H8M9 788 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 UBFD1O14562 309 aaKnown RBP12.19□□□□□ -0.46
PTCH1-212ENST00000546744 ANKRD28O15084 1053 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 SHMT2P34897 504 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 DLSTP36957 453 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 GDF5P43026 501 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 IRF5Q13568 498 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 DUSP6Q16828 381 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 FAM214AQ32MH5 1076 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 PLK5Q496M5 336 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 FAM205BPQ63HN1 556 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 KCTD20Q7Z5Y7 419 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 OR4N4Q8N0Y3 316 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF417Q8TAU3 575 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 SCARB1Q8WTV0 552 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 GGHQ92820 318 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 YIPF4Q9BSR8 244 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 ARNT2Q9HBZ2 717 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF304Q9HCX3 659 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 GSKIPQ9P0R6 139 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 SPDEFO95238 335 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 CSTBP04080 98 aaKnown RBP12.19□□□□□ -0.46
PTCH1-212ENST00000546744 ADORA3P0DMS8 318 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 C1GALT1C1LP0DN25 315 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 FXYD6P3P58550 94 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 RAB8AP61006 207 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 CARD16Q5EG05 197 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 MANEALQ5VSG8 457 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 SFRP4Q6FHJ7 346 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-212ENST00000546744 KIAA1324Q6UXG2 1013 aaKnown RBP12.19□□□□□ -0.46
PTCH1-212ENST00000546744 KRTCAP2Q8N6L1 136 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 CAMKVQ8NCB2 501 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 CCDC54Q8NEL0 328 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 OR9A1PQ8NGU1 263 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 ASB13Q8WXK3 278 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 RPL3LQ92901 407 aaKnown RBP12.19□□□□□ -0.46
PTCH1-212ENST00000546744 FAM46BQ96A09 425 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 PIGMQ9H3S5 423 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 ACTL8Q9H568 366 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 GAREM1Q9H706 876 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 Q9N2J8 555 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 RNASET2O00584 256 aaKnown RBP12.19□□□□□ -0.46
PTCH1-212ENST00000546744 SDC3O75056 442 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
PTCH1-212ENST00000546744 LRRC37A5PQ49AS3 106 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 HENMT1Q5T8I9 393 aaKnown RBP12.19□□□□□ -0.46
PTCH1-212ENST00000546744 VTCN1Q7Z7D3 282 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF565Q8N9K5 539 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 LPPQ93052 612 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 AHCYL2Q96HN2 611 aaKnown RBP12.19□□□□□ -0.46
PTCH1-212ENST00000546744 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 SPIN2AQ99865 258 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 SPIN2BQ9BPZ2 258 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 C17orf62Q9BQA9 187 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 BCAS3Q9H6U6 928 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 VAPAQ9P0L0 249 aa12.19□□□□□ -0.46
PTCH1-212ENST00000546744 UBL3O95164 117 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 SYPP08247 313 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 PSMB1P20618 241 aaKnown RBP12.18□□□□□ -0.46
PTCH1-212ENST00000546744 NFATC2Q13469 925 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 RGNQ15493 299 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 WASH2PQ6VEQ5 465 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 ABHD13Q7L211 337 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 TMEM145Q8NBT3 493 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 P2RY13Q9BPV8 354 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 ATP13A2Q9NQ11 1180 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 NANSQ9NR45 359 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 THSD1Q9NS62 852 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 MYH4Q9Y623 1939 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 RPP14O95059 124 aaKnown RBP12.18□□□□□ -0.46
PTCH1-212ENST00000546744 DRD5P21918 477 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 CD52P31358 61 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 CDKN2DP55273 166 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 MAP2K5Q13163 448 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 RAB11BQ15907 218 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF440Q8IYI8 595 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 WDR26Q9H7D7 661 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 PLCXD1Q9NUJ7 323 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 SOHLH2Q9NX45 425 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 COQ3Q9NZJ6 369 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 FCF1Q9Y324 198 aaKnown RBP12.18□□□□□ -0.46
PTCH1-212ENST00000546744 EMC8O43402 210 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 MAFKO60675 156 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 PRKCGP05129 697 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 VIPR1P32241 457 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms