RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ADAM8P78325 824 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 PUDPQ08623 228 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 GANABQ14697 944 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF789Q5FWF6 425 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 LRIF1Q5T3J3 769 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 GARNL3Q5VVW2 1013 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TMEM135Q86UB9 458 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TDRPQ86YL5 185 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 OR4N5Q8IXE1 308 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 AKAP1Q92667 903 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 KIAA1191Q96A73 305 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 MUCL1Q96DR8 90 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 C11orf24Q96F05 449 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CD180Q99467 661 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TMEM121BQ9BXQ6 578 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SOX17Q9H6I2 414 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 C11orf16Q9NQ32 467 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TMEM184CQ9NVA4 438 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 GPR160Q9UJ42 338 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 PCDHGA7Q9Y5G6 932 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CABIN1Q9Y6J0 2220 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 THSD7BQ9C0I4 1608 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 PRSS51A0A1B0GVH4 220 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 NPIPB15A6NHN6 443 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 EPOPA6NHQ4 379 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 MANBAO00462 879 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 RPP14O95059 124 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 PSMA1P25786 263 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 RPS9P46781 194 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 MTPNP58546 118 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TBPL1P62380 186 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TXNL4AP83876 142 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CTBSQ01459 385 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TMEM236Q5W0B7 351 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CARD17Q5XLA6 110 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 FAM205BPQ63HN1 556 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ZER1Q7Z7L7 766 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 FAM109AQ8N4B1 249 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 LSM14AQ8ND56 463 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 OR8K5Q8NH50 307 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ADAMTS16Q8TE57 1224 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SNAPC3Q92966 411 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 C7orf26Q96N11 449 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 F2RL3Q96RI0 385 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 FOXQ1Q9C009 403 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CST11Q9H112 138 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 C1orf226A1L170 272 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 GFRA2O00451 464 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SLC16A5O15375 505 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ALDOAP04075 364 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ENGP17813 658 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CD9P21926 228 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TAGLNQ01995 201 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SCN1BQ07699 218 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 MALLQ13021 153 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TSC22D1Q15714 1073 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 AGAP7PQ5VUJ5 663 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 LAPTM4BQ86VI4 370 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 LRRC25Q8N386 305 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ZADH2Q8N4Q0 377 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 IL17RCQ8NAC3 791 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SP7Q8TDD2 431 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ZFP90Q8TF47 636 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 LRCH3Q96II8 777 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CCDC106Q9BWC9 280 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TWSG1Q9GZX9 223 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ACTR10Q9NZ32 417 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 LHX3Q9UBR4 397 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 COLQQ9Y215 455 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 RNF11Q9Y3C5 154 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TRBC2A0A5B9 178 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SLC30A4O14863 429 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 HTRA2O43464 458 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 UGT2B11O75310 529 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SCGNO76038 276 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 HCKP08631 526 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 MTHFD1P11586 935 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SRFP11831 508 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 NR0B1P51843 470 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 GBX2P52951 348 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CHRNEQ04844 493 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 DBPQ10586 325 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ST3GAL4Q11206 333 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 MADCAM1Q13477 382 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 OXA1LQ15070 435 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CDONQ4KMG0 1287 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CCBE1Q6UXH8 406 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 GOLGA7Q7Z5G4 137 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 BTLAQ7Z6A9 289 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 PLD6Q8N2A8 252 aaKnown RBP8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CHCHD4Q8N4Q1 142 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF781Q8N8C0 355 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 OR4K1Q8NGD4 311 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 RAB8BQ92930 207 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 HAVCR1Q96D42 359 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TBX5Q99593 518 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 MROQ9BYG7 248 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 UCK2Q9BZX2 261 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms