RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 ABCA4P78363 2273 aa3.33□□□□□ -1.88
LPCAT3-212ENST00000545459 ACANP16112 2415 aa3.33□□□□□ -1.88
LPCAT3-212ENST00000545459 ABCA2Q9BZC7 2435 aa3.33□□□□□ -1.88
LPCAT3-212ENST00000545459 ANKHD1Q8IWZ3 2542 aaKnown RBP3.33□□□□□ -1.88
LPCAT3-212ENST00000545459 ZFHX3Q15911 3703 aa3.33□□□□□ -1.88
LPCAT3-212ENST00000545459 AKAP6Q13023 2319 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 IQANK1A0A1B0GTG1 560 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 MBD3L4A6NDZ8 208 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 MBD3L3A6NE82 208 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 MBD3L5A6NJ08 208 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 CD8B2A6NJW9 211 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 OR6C76A6NM76 312 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 CLCA1A8K7I4 914 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 EEF1E1-BLOC1S5C9J1V9 151 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SAP18O00422 153 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 TP53I11O14683 189 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 PHGDHO43175 533 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 EEF1E1O43324 174 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 OR10H2O60403 315 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 CCNT2O60583 730 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SH3BGRLO75368 114 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 TRAPPC6AO75865 159 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 PIAS1O75925 651 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SNX4O95219 450 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 GOSR1O95249 250 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 ACSL3O95573 720 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 S100BP04271 92 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 HPNP05981 417 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 INHBBP09529 407 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 CCDC166P0CW27 439 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 PCNAP12004 261 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 CD1DP15813 335 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 ALOX15P16050 662 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 CTSSP25774 331 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 GDF1P27539 372 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 ADSLP30566 484 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SERPINB1P30740 379 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 TLX1P31314 330 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 OPRM1P35372 400 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 CASP2P42575 452 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SSR2P43308 183 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 RPL21P46778 160 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 MASP1P48740 699 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 CDK9P50750 372 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 AGFG1P52594 562 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SLC12A2P55011 1212 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 ARL4CP56559 192 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SLC37A1P57057 533 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 FBXW4P57775 412 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 ATP6V0D1P61421 351 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 HERVK_113P63132 956 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 ERVK-8P63133 956 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 NKX6-1P78426 367 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SORDQ00796 357 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 TNFRSF17Q02223 184 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 IRF8Q02556 426 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 ILF2Q12905 390 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 PDIA2Q13087 525 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SLAMF1Q13291 335 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 E2F2Q14209 437 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 ZNF267Q14586 743 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 FASTKD3Q14CZ7 662 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 EBPQ15125 230 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SF3B4Q15427 424 aaKnown RBP eCLIP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 OR4D1Q15615 310 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 NTRK2Q16620 822 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 PRSS53Q2L4Q9 553 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 TM4SF20Q53R12 229 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 NHSL2Q5HYW2 709 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 DEPDC1Q5TB30 811 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 FNDC7Q5VTL7 733 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 KHDRBS2Q5VWX1 349 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 NSUN5P2Q63ZY6 315 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 TMEM198Q66K66 360 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 C18orf63Q68DL7 685 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 BICRALQ6AI39 1079 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 VASNQ6EMK4 673 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 OR4C11Q6IEV9 310 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 MED27Q6P2C8 311 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 TMEM64Q6YI46 380 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SYDE1Q6ZW31 735 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SLC29A4Q7RTT9 530 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 GPR180Q86V85 440 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 KRTAP1-3Q8IUG1 177 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 LAS2Q8IYD9 372 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 PM20D2Q8IYS1 436 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 ST13P4Q8IZP2 240 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 TAGAPQ8N103 731 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 SLC35F6Q8N357 371 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 ZCCHC7Q8N3Z6 543 aaKnown RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 PDPRQ8NCN5 879 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 FBXO36Q8NEA4 188 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 OR7G3Q8NG95 312 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 MBD3L2Q8NHZ7 208 aaPredicted RBP3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 LINC01560Q8TB33 94 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 DOK4Q8TEW6 326 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 DIO2Q92813 273 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 TANKQ92844 425 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 RIT1Q92963 219 aa3.32□□□□□ -1.88
LPCAT3-212ENST00000545459 UBE2E3Q969T4 207 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms