RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 FAM180BQ6P0A1 224 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 CD163Q86VB7 1156 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 CLYBLQ8N0X4 340 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 OR5M3Q8NGP4 307 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 CDC26Q8NHZ8 85 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 SPPL2AQ8TCT8 520 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 ZNF597Q96LX8 424 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 PHF12Q96QT6 1004 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 ITPAQ9BY32 194 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 NXF5Q9H1B4 397 aaKnown RBP21.38■■□□□ 1.01
CHFR-222ENST00000544093 LRTM1Q9HBL6 345 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 POLR3HQ9Y535 204 aaPredicted RBP21.38■■□□□ 1.01
CHFR-222ENST00000544093 CRYBG3Q68DQ2 2970 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 NINQ8N4C6 2090 aa21.38■■□□□ 1.01
CHFR-222ENST00000544093 FRG2CA6NGY1 282 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 RGS16O15492 202 aaPredicted RBP21.37■■□□□ 1.01
CHFR-222ENST00000544093 PLOD3O60568 738 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 HCN1O60741 890 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 PPM1BO75688 479 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 NTSP30990 170 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 EMDP50402 254 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 FBXW4P57775 412 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 ZNF844Q08AG5 666 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 KIAA0040Q15053 153 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 ARL13AQ5H913 290 aaPredicted RBP21.37■■□□□ 1.01
CHFR-222ENST00000544093 TMEM211Q6ICI0 200 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 TMEM81Q6P7N7 255 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 TRILQ7L0X0 811 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 NUP54Q7Z3B4 507 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 PACS2Q86VP3 889 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 OR9A2Q8NGT5 310 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 CCT7Q99832 543 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 ZNF703Q9H7S9 590 aaPredicted RBP21.37■■□□□ 1.01
CHFR-222ENST00000544093 SSU72Q9NP77 194 aaKnown RBP21.37■■□□□ 1.01
CHFR-222ENST00000544093 DTX4Q9Y2E6 619 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 DNAJC15Q9Y5T4 150 aa21.37■■□□□ 1.01
CHFR-222ENST00000544093 MYO1GB0I1T2 1018 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 AQP7O14520 342 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 TO15178 435 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 TYROBPO43914 113 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 SOX18P35713 384 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 ADORA2A-AS1P86434 159 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 PLCXD2Q0VAA5 305 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 DUSP8Q13202 625 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 TMEM64Q6YI46 380 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 TICAM1Q8IUC6 712 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 SARAFQ96BY9 339 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 ZNF764Q96H86 408 aaPredicted RBP21.36■■□□□ 1.01
CHFR-222ENST00000544093 BTBD9Q96Q07 612 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 DMRTA2Q96SC8 542 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 MECRQ9BV79 373 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 ANGPTL4Q9BY76 406 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 LDAHQ9H6V9 325 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 PROK2Q9HC23 129 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 ACKR4Q9NPB9 350 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 CHST11Q9NPF2 352 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 TAS2R9Q9NYW1 312 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 FIS1Q9Y3D6 152 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 TRAF6Q9Y4K3 522 aa21.36■■□□□ 1.01
CHFR-222ENST00000544093 A0A087WV62 115 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 ATP6AP2A0A1C7CYW4 349 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 PRSS44E7EML9 344 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 CTIFO43310 598 aaKnown RBP21.35■■□□□ 1.01
CHFR-222ENST00000544093 ABCB7O75027 752 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 COQ9O75208 318 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 TRIM3O75382 744 aaPredicted RBP21.35■■□□□ 1.01
CHFR-222ENST00000544093 ATP6AP2O75787 350 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 ABCB1P08183 1280 aaPredicted RBP21.35■■□□□ 1.01
CHFR-222ENST00000544093 IFI6P09912 130 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 DDX5P17844 614 aaKnown RBP21.35■■□□□ 1.01
CHFR-222ENST00000544093 MAN2A2P49641 1150 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 SNTA1Q13424 505 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 OMA1Q96E52 524 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 JSRP1Q96MG2 331 aaPredicted RBP21.35■■□□□ 1.01
CHFR-222ENST00000544093 RILPQ96NA2 401 aa21.35■■□□□ 1.01
CHFR-222ENST00000544093 GPR55Q9Y2T6 319 aaPredicted RBP21.35■■□□□ 1.01
CHFR-222ENST00000544093 CELSR2Q9HCU4 2923 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 LRRC3CA6NJW4 275 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 FIGNL2A6NMB9 653 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 CYSRT1A8MQ03 144 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 CHRNGP07510 517 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 BPGMP07738 259 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 ELAVL4P26378 380 aaKnown RBP21.34■■□□□ 1.01
CHFR-222ENST00000544093 DCTP40126 519 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 MASP1P48740 699 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 NCBP2P52298 156 aaKnown RBP eCLIP21.34■■□□□ 1.01
CHFR-222ENST00000544093 NNATQ16517 81 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 HIST2H2BCQ6DN03 193 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 Q6ZSR9 355 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 DDIASQ8IXT1 998 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 TWIST2Q8WVJ9 160 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 KAT2AQ92830 837 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 TMEM41AQ96HV5 264 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 FCRL1Q96LA6 429 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 RUBCNLQ9H714 662 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 EXO5Q9H790 373 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 COQ3Q9NZJ6 369 aa21.34■■□□□ 1.01
CHFR-222ENST00000544093 TRGV5A0A0B4J1U4 118 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 OR6C70A6NIJ9 312 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 NPIPA2E9PIF3 369 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms