RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 SIRT5Q9NXA8 310 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 PRODH2Q9UF12 536 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 TIMM22Q9Y584 194 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 TACC2O95359 2948 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 FAM90A27PA6NNH2 459 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 H3BQF6 201 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 PROCP04070 461 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 SHBGP04278 402 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 PCSK2P16519 638 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 IGFBP2P18065 325 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 CASP3P42574 277 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 TFF3Q07654 80 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 HEPACAMQ14CZ8 416 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 CCDC153Q494R4 210 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 TRMT12Q53H54 448 aaKnown RBP19.21■□□□□ 0.67
CHFR-217ENST00000540537 FAM180BQ6P0A1 224 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 TMEM81Q6P7N7 255 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 PACS2Q86VP3 889 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 CCNYL1Q8N7R7 359 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 C16orf78Q8WTQ4 265 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 UBLCP1Q8WVY7 318 aaPredicted RBP19.21■□□□□ 0.67
CHFR-217ENST00000540537 NTNG2Q96CW9 530 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 C14orf79Q96F83 325 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 TMEM41AQ96HV5 264 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 LURAP1Q96LR2 239 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 SHCBP1LQ9BZQ2 653 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 UBQLN3Q9H347 655 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 KCNJ16Q9NPI9 418 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 PFDN4Q9NQP4 134 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 PLLPQ9Y342 182 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 PDZD2O15018 2839 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 ARHGAP21Q5T5U3 1957 aa19.21■□□□□ 0.67
CHFR-217ENST00000540537 NKX2-6A6NCS4 301 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 UBFD1O14562 309 aaKnown RBP19.2■□□□□ 0.66
CHFR-217ENST00000540537 PLIN3O60664 434 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 BCAS2O75934 225 aaPredicted RBP19.2■□□□□ 0.66
CHFR-217ENST00000540537 TOXO94900 526 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 CCT5P48643 541 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 MASP1P48740 699 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 TRPC1P48995 793 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 DNAJB13P59910 316 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 NNATQ16517 81 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 ZNF628Q5EBL2 1059 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 FNDC7Q5VTL7 733 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 FRMD7Q6ZUT3 714 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 SIMC1Q8NDZ2 872 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 OR10Q1Q8NGQ4 319 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHFR-217ENST00000540537 HGDQ93099 445 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 OMA1Q96E52 524 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 UCK2Q9BZX2 261 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 L2HGDHQ9H9P8 463 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 GIMAP4Q9NUV9 329 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 EHD3Q9NZN3 535 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 GRID1Q9ULK0 1009 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 C15orf41Q9Y2V0 281 aa19.2■□□□□ 0.66
CHFR-217ENST00000540537 FOXO6A8MYZ6 492 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 FAM47E-STBD1D6RA91 191 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 TO15178 435 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 HPNP05981 417 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 DRD5P21918 477 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 MSX1P28360 303 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 CRHR1P34998 444 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 PPICP45877 212 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 SLCO1A2P46721 670 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 ZFP36L2P47974 494 aaKnown RBP19.19■□□□□ 0.66
CHFR-217ENST00000540537 EMDP50402 254 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 CDK9P50750 372 aaKnown RBP19.19■□□□□ 0.66
CHFR-217ENST00000540537 NAGLUP54802 743 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 FOXA1P55317 472 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 MRPS35P82673 323 aaKnown RBP19.19■□□□□ 0.66
CHFR-217ENST00000540537 PLCXD2Q0VAA5 305 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 CEBPEQ15744 281 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 NUP54Q7Z3B4 507 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 ULK2Q8IYT8 1036 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 CCDC116Q8IYX3 515 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 RDH11Q8TC12 318 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 EXOSC8Q96B26 276 aaKnown RBP19.19■□□□□ 0.66
CHFR-217ENST00000540537 EBPLQ9BY08 206 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 METTL7AQ9H8H3 244 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 NPDC1Q9NQX5 325 aaPredicted RBP19.19■□□□□ 0.66
CHFR-217ENST00000540537 ALKBH4Q9NXW9 302 aa19.19■□□□□ 0.66
CHFR-217ENST00000540537 C15orf38-AP3S2A0A0A6YYH1 394 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 A0A0G2JNJ9 132 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 FRG2CA6NGY1 282 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 ANXA4P09525 319 aaPredicted RBP19.18■□□□□ 0.66
CHFR-217ENST00000540537 ELAVL4P26378 380 aaKnown RBP19.18■□□□□ 0.66
CHFR-217ENST00000540537 BTKQ06187 659 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 SNTA1Q13424 505 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 CFAP157Q5JU67 520 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 RIPPLY2Q5TAB7 128 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 SLC30A6Q6NXT4 461 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 SCIMPQ6UWF3 145 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 SLC35C2Q9NQQ7 365 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 Q9UFV3 132 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 GPR55Q9Y2T6 319 aaPredicted RBP19.18■□□□□ 0.66
CHFR-217ENST00000540537 OTOGQ6ZRI0 2925 aa19.18■□□□□ 0.66
CHFR-217ENST00000540537 COPEO14579 308 aa19.17■□□□□ 0.66
CHFR-217ENST00000540537 TRAPPC6AO75865 159 aa19.17■□□□□ 0.66
CHFR-217ENST00000540537 ADH7P40394 386 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms