RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ETFAP13804 333 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 GTF2F2P13984 249 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 RPS2P15880 293 aaKnown RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 KDELR2P33947 212 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 OR10A3P58181 314 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 ZNF79Q15937 498 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 FRRS1Q6ZNA5 592 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 NAXEQ8NCW5 288 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 SLC25A46Q96AG3 418 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 DUS3LQ96G46 650 aaKnown RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 MRM3Q9HC36 420 aaKnown RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 TNFRSF10DQ9UBN6 386 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 SLC22A23A1A5C7 686 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 GABRPO00591 440 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 FKTNO75072 461 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 TRAPPC2P0DI81 140 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 TRAPPC2BP0DI82 140 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 HOXA1P49639 335 aaPredicted RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 CDH11P55287 796 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 KRT33BQ14525 404 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 POM121L1PQ3SYA9 428 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 OR52W1Q6IF63 320 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 VSIG10LQ86VR7 867 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 ZNF548Q8NEK5 533 aaPredicted RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 WFIKKN2Q8TEU8 576 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 SORCS1Q8WY21 1168 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 CNOT9Q92600 299 aaKnown RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 DPH7Q9BTV6 452 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 SIRT5Q9NXA8 310 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 NDRG3Q9UGV2 375 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 MN1Q10571 1320 aaPredicted RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 HYKKA2RU49 373 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 SIGLEC6O43699 453 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 EDNRAP25101 427 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 RPL4P36578 427 aaKnown RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 OR2B11Q5JQS5 317 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 LRRC73Q5JTD7 316 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 NAGSQ8N159 534 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 SEMA6DQ8NFY4 1073 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 OR7D4Q8NG98 312 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 OR1M1Q8NGA1 313 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 SH3RF2Q8TEC5 729 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 APH1BQ8WW43 257 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 L3HYPDHQ96EM0 354 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 MAPKAP1Q9BPZ7 522 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 BTBD17A6NE02 478 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 S100A11P31949 105 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 ETV5P41161 510 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 CLDN12P56749 244 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 C5orf46Q6UWT4 87 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 UBE2R2Q712K3 238 aaPredicted RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 ZNF565Q8N9K5 539 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 PPCDCQ96CD2 204 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 GORASP2Q9H8Y8 452 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 OSER1Q9NX31 292 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 TMEFF2Q9UIK5 374 aaPredicted RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 PKMP14618 531 aaKnown RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 DGCR2P98153 550 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 KIAA0930Q6ICG6 404 aaPredicted RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 TMEM207Q6UWW9 146 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 LINGO4Q6UY18 593 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 OR10R2Q8NGX6 335 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 RBP7Q96R05 134 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 OSMRQ99650 979 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 ATG101Q9BSB4 218 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 DOHHQ9BU89 302 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 OR51B5Q9H339 312 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 PRMT7Q9NVM4 692 aaPredicted RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 PCDHGC4Q9Y5F7 938 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 KCPQ6ZWJ8 1503 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 PMM2O15305 246 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 GPR39O43194 453 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 CDC123O75794 336 aaPredicted RBP10.53□□□□□ -0.72
PBX1-212ENST00000540236 ANXA5P08758 320 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 QDPRP09417 244 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 ARF3P61204 181 aaPredicted RBP10.53□□□□□ -0.72
PBX1-212ENST00000540236 ARF1P84077 181 aaKnown RBP10.53□□□□□ -0.72
PBX1-212ENST00000540236 KDM4DQ6B0I6 523 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 LAIR1Q6GTX8 287 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 C3orf33Q6P1S2 294 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 SFT2D1Q8WV19 159 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 OPALINQ96PE5 141 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 SMIM3Q9BZL3 60 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 LYARQ9NX58 379 aaKnown RBP10.53□□□□□ -0.72
PBX1-212ENST00000540236 PCDHB7Q9Y5E2 793 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 LOC102724200A0A096LPH7 203 aaPredicted RBP10.53□□□□□ -0.72
PBX1-212ENST00000540236 OR10H2O60403 315 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 S1PR4O95977 384 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 EGFRP00533 1210 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 HSD3B1P14060 373 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 C4orf17Q53FE4 359 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 PRRT3Q5FWE3 981 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 SLC29A4Q7RTT9 530 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 OR2T4Q8NH00 348 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 PGAP3Q96FM1 320 aaPredicted RBP10.53□□□□□ -0.72
PBX1-212ENST00000540236 OR2M2Q96R28 347 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 GNG8Q9UK08 70 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 TLR6Q9Y2C9 796 aa10.53□□□□□ -0.72
PBX1-212ENST00000540236 CACNB4O00305 520 aaPredicted RBP10.53□□□□□ -0.72
PBX1-212ENST00000540236 IFNA17P01571 189 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms