RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 FOXA1P55317 472 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 ACSM2AQ08AH3 577 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 FOXO1Q12778 655 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 TBL3Q12788 808 aaKnown RBP13.74□□□□□ -0.21
USB1-203ENST00000539737 IMPG1Q17R60 797 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 CCNYL2Q5T2Q4 361 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 PRAMEF20Q5VT98 475 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 ACSM2BQ68CK6 577 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 OR52E8Q6IFG1 317 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 RNF165Q6ZSG1 346 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 FAM47EQ6ZV65 393 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 C1orf52Q8N6N3 182 aaKnown RBP13.74□□□□□ -0.21
USB1-203ENST00000539737 TANKQ92844 425 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 TLCD1Q96CP7 247 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 ART5Q96L15 291 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 SHCBP1LQ9BZQ2 653 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 OR8D2Q9GZM6 311 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 EXO5Q9H790 373 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 RPF2Q9H7B2 306 aaKnown RBP13.74□□□□□ -0.21
USB1-203ENST00000539737 MYOTQ9UBF9 498 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 VTI1BQ9UEU0 232 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 PPIEQ9UNP9 301 aaKnown RBP13.74□□□□□ -0.21
USB1-203ENST00000539737 ATG4BQ9Y4P1 393 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 ASB4Q9Y574 426 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 TLN2Q9Y4G6 2542 aa13.74□□□□□ -0.21
USB1-203ENST00000539737 NINQ8N4C6 2090 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 FIGNL2A6NMB9 653 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 HRKO00198 91 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 LDB3O75112 727 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 SNUPNO95149 360 aaKnown RBP13.73□□□□□ -0.21
USB1-203ENST00000539737 AIFM1O95831 613 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 IGHG3P01860 377 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 SERPINE1P05121 402 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 DHRS4L1P0CG22 281 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 NEFHP12036 1026 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 DNASE1P24855 282 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 MAN2A2P49641 1150 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 MAGOHP61326 146 aaKnown RBP13.73□□□□□ -0.21
USB1-203ENST00000539737 TRA2BP62995 288 aaKnown RBP13.73□□□□□ -0.21
USB1-203ENST00000539737 HMGCS1Q01581 520 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 ARL13AQ5H913 290 aaPredicted RBP13.73□□□□□ -0.21
USB1-203ENST00000539737 AGBL2Q5U5Z8 902 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 HHATQ5VTY9 493 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 KANK2Q63ZY3 851 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 ZCCHC23Q6ZST2 131 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 TRIM46Q7Z4K8 759 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 SLC22A16Q86VW1 577 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 KRTAP1-3Q8IUG1 177 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 FAM109AQ8N4B1 249 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 GOLGA6L1Q8N7Z2 621 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 PTPMT1Q8WUK0 201 aaPredicted RBP13.73□□□□□ -0.21
USB1-203ENST00000539737 NINJ1Q92982 152 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 ZBTB9Q96C00 473 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 RBM18Q96H35 190 aaKnown RBP13.73□□□□□ -0.21
USB1-203ENST00000539737 DGAT2Q96PD7 388 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 LDAHQ9H6V9 325 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 VIPAS39Q9H9C1 493 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.73□□□□□ -0.21
USB1-203ENST00000539737 NKIRAS1Q9NYS0 192 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 MCM8Q9UJA3 840 aa13.73□□□□□ -0.21
USB1-203ENST00000539737 TMEM120BA0PK00 339 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 FAM221AA4D161 298 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 A6NNC1 897 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 C17orf105B2RV13 164 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 TMEM114B3SHH9 223 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 PCDH7O60245 1069 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 RSL1D1O76021 490 aaKnown RBP13.72□□□□□ -0.21
USB1-203ENST00000539737 GBAP04062 536 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 CHRNGP07510 517 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 BMP5P22003 454 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 TACR1P25103 407 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 GSTM5P46439 218 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 SLC18A1P54219 525 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 IGLV3-21P80748 117 aaPredicted RBP13.72□□□□□ -0.21
USB1-203ENST00000539737 PLIN5Q00G26 463 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 CHI3L2Q15782 390 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 FAM219BQ5XKK7 198 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 C18orf63Q68DL7 685 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 CLEC6AQ6EIG7 209 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 DGAT2L6Q6ZPD8 337 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 OR4N5Q8IXE1 308 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 KIRREL3Q8IZU9 778 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 ANKRD42Q8N9B4 389 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 TNIP2Q8NFZ5 429 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 OR6Y1Q8NGX8 325 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 OR8K3Q8NH51 312 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 LINC01560Q8TB33 94 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 METTL2AQ96IZ6 378 aaKnown RBP13.72□□□□□ -0.21
USB1-203ENST00000539737 MDFIQ99750 246 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 PELOQ9BRX2 385 aaKnown RBP13.72□□□□□ -0.21
USB1-203ENST00000539737 FAIM2Q9BWQ8 316 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 IL1RL2Q9HB29 575 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 TNFRSF12AQ9NP84 129 aa13.72□□□□□ -0.21
USB1-203ENST00000539737 A0A1B0GVC2 190 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 A0A1W2PPR1 153 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 A0A1W2PR48 441 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 KIAA1324LA8MWY0 1029 aaPredicted RBP13.71□□□□□ -0.21
USB1-203ENST00000539737 SLC28A1O00337 649 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 AQP7O14520 342 aa13.71□□□□□ -0.21
USB1-203ENST00000539737 BCKDKO14874 412 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms