RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CASP3P42574 277 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 RPS25P62851 125 aaKnown RBP13.24□□□□□ -0.29
UBE3B-210ENST00000539599 KRT33BQ14525 404 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF79Q15937 498 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 C2orf27AQ580R0 203 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 MFSD4BQ5TF39 518 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 PHC2Q8IXK0 858 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 TMEFF1Q8IYR6 380 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 HDDC3Q8N4P3 179 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 KCT2Q8NC54 265 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 CAMK1GQ96NX5 476 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF607Q96SK3 696 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 SLC30A2Q9BRI3 323 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 PLA2G2FQ9BZM2 168 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 MMP28Q9H239 520 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 MGAT4BQ9UQ53 548 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 PEX16Q9Y5Y5 336 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 A0A087WUU8 490 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 CENPVL1A0A0U1RR11 272 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 MYL12BO14950 172 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 PIP5K1CO60331 668 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 NCR1O76036 304 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 SNX4O95219 450 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 SLC2A10O95528 541 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 FGF19O95750 216 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 GSTM5P46439 218 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 MAN2A2P49641 1150 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 HNRNPA0Q13151 305 aaKnown RBP13.24□□□□□ -0.29
UBE3B-210ENST00000539599 TMEM31Q5JXX7 168 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 LHFPL3Q86UP9 236 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 GATAD2AQ86YP4 633 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 CAMKK1Q8N5S9 505 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 MINDY2Q8NBR6 621 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 MORN4Q8NDC4 146 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 OR52E1Q8NGJ3 308 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 GANCQ8TET4 914 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 DMRTB1Q96MA1 342 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF582Q96NG8 517 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-210ENST00000539599 WDR26Q9H7D7 661 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 SP140LQ9H930 580 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 PELI2Q9HAT8 420 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 CD93Q9NPY3 652 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 TSC22D4Q9Y3Q8 395 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 CHST2Q9Y4C5 530 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 AP1M2Q9Y6Q5 423 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 V9GYH0 126 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 C2orf16Q68DN1 1984 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 MUC22E2RYF6 1773 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-210ENST00000539599 SLC35F4A4IF30 521 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 A8MVJ9 347 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 MAN2B1O00754 1011 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 SEMA3DO95025 777 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 OXSR1O95747 527 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-210ENST00000539599 LALBAP00709 142 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 FRKP42685 505 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-210ENST00000539599 GPR4P46093 362 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 PCYT1AP49585 367 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 ID2Q02363 134 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF45Q02386 682 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 TMEM240Q5SV17 173 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 C6orf132Q5T0Z8 1188 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 KIAA1211LQ6NV74 962 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 SLC30A6Q6NXT4 461 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 TMEM53Q6P2H8 277 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 ADAMTSL4Q6UY14 1074 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 NKAIN4Q8IVV8 208 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 NANOGP1Q8N7R0 232 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 ACOT4Q8N9L9 421 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 BBS1Q8NFJ9 593 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 CAPSLQ8WWF8 208 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 OTULINQ96BN8 352 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 OR2A14Q96R47 310 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 ABCB9Q9NP78 766 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 SEMA4GQ9NTN9 838 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 MKLN1Q9UL63 735 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 CFL2Q9Y281 166 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 CFAP54Q96N23 3096 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 HTR3EA5X5Y0 456 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 EFCAB14O75071 495 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 GIPRP48546 466 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 SNRPGP62308 76 aaKnown RBP13.23□□□□□ -0.29
UBE3B-210ENST00000539599 PRDX1Q06830 199 aaKnown RBP13.23□□□□□ -0.29
UBE3B-210ENST00000539599 CDC20Q12834 499 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 TOR1AIP1Q5JTV8 583 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 RD3Q7Z3Z2 195 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 GLCCI1Q86VQ1 547 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 OR8J1Q8NGP2 316 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 C9orf43Q8TAL5 461 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-210ENST00000539599 RPP25Q9BUL9 199 aaKnown RBP13.23□□□□□ -0.29
UBE3B-210ENST00000539599 DDX31Q9H8H2 851 aaKnown RBP13.23□□□□□ -0.29
UBE3B-210ENST00000539599 CPNE5Q9HCH3 593 aa13.23□□□□□ -0.29
UBE3B-210ENST00000539599 APOBEC3BQ9UH17 382 aaKnown RBP13.23□□□□□ -0.29
UBE3B-210ENST00000539599 ZC3H12DA2A288 527 aaKnown RBP13.22□□□□□ -0.29
UBE3B-210ENST00000539599 SLC31A1O15431 190 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 NFATC1O95644 943 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 CSF2P04141 144 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 MSL3P1P0C860 447 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 SDC2P34741 201 aa13.22□□□□□ -0.29
UBE3B-210ENST00000539599 GJA4P35212 333 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms