RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 FAM20AQ96MK3 541 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 GPR137Q96N19 417 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 SIGLEC11Q96RL6 698 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CCNL2Q96S94 520 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 GFI1Q99684 422 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 WRAP53Q9BUR4 548 aaKnown RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 DUSP26Q9BV47 211 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 FNDC11Q9BVV2 318 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 TM6SF1Q9BZW5 370 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 WWP1Q9H0M0 922 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 FBXO44Q9H4M3 255 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 TMEM165Q9HC07 324 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 RAB9BQ9NP90 201 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 HINT3Q9NQE9 182 aaKnown RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 GAR1Q9NY12 217 aaKnown RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 MBD2Q9UBB5 411 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 PISDQ9UG56 409 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ERRFI1Q9UJM3 462 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 CDH9Q9ULB4 789 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 SATB2Q9UPW6 733 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 TNNQ9UQP3 1299 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 RAP2CQ9Y3L5 183 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 KLF2Q9Y5W3 355 aaPredicted RBP3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 ZNF831Q5JPB2 1677 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 PKD1L1Q8TDX9 2849 aa3.52□□□□□ -1.85
AC055720.1-201ENST00000539552 NBEAL2Q6ZNJ1 2754 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 ABCC11Q96J66 1382 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 ATXN2Q99700 1313 aaKnown RBP3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 NFAT5O94916 1531 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 A0A1B0GUH1 482 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CCDC162PA2VCL2 907 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CXorf65A6NEN9 183 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 DNAJC9-AS1A6NH13 148 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 TUBAL3A6NHL2 446 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CD8B2A6NJW9 211 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 C9JVG2 144 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 PRSS46E5RG02 174 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 NPIPA2E9PIF3 369 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 F8VVB4 439 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 F8VWA3 439 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 FOXE1O00358 373 aaPredicted RBP3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 NR5A2O00482 541 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 SDHDO14521 159 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 SLC16A5O15375 505 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 TLX3O43711 291 aaPredicted RBP3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 ATP6AP2O75787 350 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 TM7SF2O76062 418 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CPNE6O95741 557 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 GSRP00390 522 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CALCAP01258 141 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 MBP02144 154 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 UQCRC2P22695 453 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 FCARP24071 287 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 ARRB2P32121 409 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 PTGER4P35408 488 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CCR4P51679 360 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 ARHGDIAP52565 204 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 NUDT6P53370 316 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CLDN15P56746 228 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 RGS8P57771 180 aaPredicted RBP3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 RAB11AP62491 216 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 SLC3A1Q07837 685 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 IL10RBQ08334 325 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 GRIK2Q13002 908 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 GAGE2BQ13066 116 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 STIM1Q13586 685 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CYLC2Q14093 348 aaPredicted RBP3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 KEAP1Q14145 624 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 RAB11BQ15907 218 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 AMZ1Q400G9 498 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 GAGE2EQ4V326 116 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 SYTL3Q4VX76 610 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 ZC2HC1CQ53FD0 456 aaPredicted RBP3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 HSP90AA4PQ58FG1 418 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CMPK2Q5EBM0 449 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 RNASE12Q5GAN4 147 aaKnown RBP3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 PPP6R3Q5H9R7 873 aaPredicted RBP3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 PRAMEF19Q5SWL8 479 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 GAGE2AQ6NT46 116 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CEP85Q6P2H3 762 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 TMEM53Q6P2H8 277 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 TMPRSS11FQ6ZWK6 438 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 SLC24A5Q71RS6 500 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 BCDIN3DQ7Z5W3 292 aaKnown RBP3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 LHFPL4Q7Z7J7 247 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 FJX1Q86VR8 437 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 LONP2Q86WA8 852 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CBWD2Q8IUF1 395 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 MICU2Q8IYU8 434 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 ADGRF4Q8IZF3 695 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 LINC01465Q8N7H1 131 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 CEP112Q8N8E3 955 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 SCCPDHQ8NBX0 429 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 M1APQ8TC57 530 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 LRRC20Q8TCA0 184 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 ZNF398Q8TD17 642 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 GRHL3Q8TE85 626 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 SPRYD4Q8WW59 207 aaPredicted RBP3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 LPAR1Q92633 364 aa3.51□□□□□ -1.85
AC055720.1-201ENST00000539552 PROX1Q92786 737 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms