RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 GLRA3O75311 464 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 ABCB1P08183 1280 aaPredicted RBP20.33■□□□□ 0.85
SCARB1-206ENST00000539320 PCSK2P16519 638 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 NAGAP17050 411 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 TIA1P31483 386 aaKnown RBP eCLIP20.33■□□□□ 0.85
SCARB1-206ENST00000539320 SOX18P35713 384 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 ADH7P40394 386 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 CASP3P42574 277 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 CDK9P50750 372 aaKnown RBP20.33■□□□□ 0.85
SCARB1-206ENST00000539320 RAE1P78406 368 aaKnown RBP20.33■□□□□ 0.85
SCARB1-206ENST00000539320 HMGCS1Q01581 520 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 RIPPLY2Q5TAB7 128 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 FNDC7Q5VTL7 733 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 ZNF675Q8TD23 568 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 OMA1Q96E52 524 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 HSPBAP1Q96EW2 488 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 TMEM41AQ96HV5 264 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 LCORQ96JN0 433 aaPredicted RBP20.33■□□□□ 0.85
SCARB1-206ENST00000539320 KCNA7Q96RP8 456 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 UBQLN3Q9H347 655 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 GSTO2Q9H4Y5 243 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 METTL7AQ9H8H3 244 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 MCCC2Q9HCC0 563 aa20.33■□□□□ 0.85
SCARB1-206ENST00000539320 ANKHD1Q8IWZ3 2542 aaKnown RBP20.32■□□□□ 0.84
SCARB1-206ENST00000539320 SPG11Q96JI7 2443 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 TRAPPC6AO75865 159 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 DRD2P14416 443 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 KRTAP10-9P60411 292 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 DCAF7P61962 342 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 MRPS35P82673 323 aaKnown RBP20.32■□□□□ 0.84
SCARB1-206ENST00000539320 CRYZQ08257 329 aaKnown RBP20.32■□□□□ 0.84
SCARB1-206ENST00000539320 SAMD14Q8IZD0 417 aaPredicted RBP20.32■□□□□ 0.84
SCARB1-206ENST00000539320 SIMC1Q8NDZ2 872 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 HGDQ93099 445 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 CCDC126Q96EE4 140 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 APIPQ96GX9 242 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 GIMAP4Q9NUV9 329 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 DCDC2Q9UHG0 476 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 EMCNQ9ULC0 261 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 TIMM22Q9Y584 194 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 PDZD2O15018 2839 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 TEP1Q99973 2627 aaKnown RBP20.32■□□□□ 0.84
SCARB1-206ENST00000539320 OTOGQ6ZRI0 2925 aa20.32■□□□□ 0.84
SCARB1-206ENST00000539320 HPNP05981 417 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 MYL2P10916 166 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 SLC25A35Q3KQZ1 300 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 TRMT12Q53H54 448 aaKnown RBP20.31■□□□□ 0.84
SCARB1-206ENST00000539320 ZNF628Q5EBL2 1059 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 TMEM81Q6P7N7 255 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 ZYG11AQ6WRX3 759 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 DMRTC2Q8IXT2 367 aaPredicted RBP20.31■□□□□ 0.84
SCARB1-206ENST00000539320 CCNYL1Q8N7R7 359 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 LRRN4CLQ8ND94 238 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 C16orf78Q8WTQ4 265 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 EXOSC8Q96B26 276 aaKnown RBP20.31■□□□□ 0.84
SCARB1-206ENST00000539320 NTNG2Q96CW9 530 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 OSBPL11Q9BXB4 747 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 EBPLQ9BY08 206 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 MID1IP1Q9NPA3 183 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 ARHGAP21Q5T5U3 1957 aa20.31■□□□□ 0.84
SCARB1-206ENST00000539320 ANKRD17O75179 2603 aaKnown RBP20.3■□□□□ 0.84
SCARB1-206ENST00000539320 FRG2CA6NGY1 282 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 GNB5O14775 395 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 CAPN3P20807 821 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 EMDP50402 254 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 HEPACAMQ14CZ8 416 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 ACSF3Q4G176 576 aaPredicted RBP20.3■□□□□ 0.84
SCARB1-206ENST00000539320 TIGD3Q6B0B8 471 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 GALNT18Q6P9A2 607 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 ANGPTL8Q6UXH0 198 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 NUP54Q7Z3B4 507 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 CCDC116Q8IYX3 515 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 CLYBLQ8N0X4 340 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 OR9A2Q8NGT5 310 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 ERP27Q96DN0 273 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 GNRHR2Q96P88 292 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 NODALQ96S42 347 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 EHD3Q9NZN3 535 aa20.3■□□□□ 0.84
SCARB1-206ENST00000539320 MED12Q93074 2177 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 A0A1W2PPM1 405 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 SERTM1A2A2V5 107 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 PRAMEF25A6NGN4 478 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 G3V2L1 256 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 SNPHO15079 494 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 TO15178 435 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 UGT2B11O75310 529 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 BCAS2O75934 225 aaPredicted RBP20.29■□□□□ 0.84
SCARB1-206ENST00000539320 PROCP04070 461 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 PTPN6P29350 595 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 PPICP45877 212 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 GSTM5P46439 218 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 NAA20P61599 178 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 BTKQ06187 659 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 TOMM20Q15388 145 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 ERCC6LQ2NKX8 1250 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 DESI1Q6ICB0 168 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 SLC30A6Q6NXT4 461 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 SCIMPQ6UWF3 145 aa20.29■□□□□ 0.84
SCARB1-206ENST00000539320 WDR53Q7Z5U6 358 aaPredicted RBP20.29■□□□□ 0.84
SCARB1-206ENST00000539320 LIX1LQ8IVB5 337 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms