RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 PTGER4P35408 488 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 PPICP45877 212 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 EMDP50402 254 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 FBXW4P57775 412 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 BTKQ06187 659 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 EXOSC7Q15024 291 aaKnown RBP10.61□□□□□ -0.71
RTN3-209ENST00000538995 LTB4RQ15722 352 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 ERCC6LQ2NKX8 1250 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 TRMT12Q53H54 448 aaKnown RBP10.61□□□□□ -0.71
RTN3-209ENST00000538995 EMC4Q5J8M3 183 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 TMEM198Q66K66 360 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 SP5Q6BEB4 398 aaPredicted RBP10.61□□□□□ -0.71
RTN3-209ENST00000538995 FAM71E1Q6IPT2 247 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 SCIMPQ6UWF3 145 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 TMEM64Q6YI46 380 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 C3P1Q6ZMU1 363 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 ACAD11Q709F0 780 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 FAM9CQ8IZT9 166 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 MREGQ8N565 214 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 ADCY4Q8NFM4 1077 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 OR5M3Q8NGP4 307 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 OR9A2Q8NGT5 310 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.61□□□□□ -0.71
RTN3-209ENST00000538995 ASB5Q8WWX0 329 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 MARVELD3Q96A59 401 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 EXOSC8Q96B26 276 aaKnown RBP10.61□□□□□ -0.71
RTN3-209ENST00000538995 NTNG2Q96CW9 530 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 ZNF764Q96H86 408 aaPredicted RBP10.61□□□□□ -0.71
RTN3-209ENST00000538995 TMEM41AQ96HV5 264 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 RILPQ96NA2 401 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 BTBD9Q96Q07 612 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 TMEM109Q9BVC6 243 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 GATA5Q9BWX5 397 aaPredicted RBP10.61□□□□□ -0.71
RTN3-209ENST00000538995 EBPLQ9BY08 206 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 ANGPTL4Q9BY76 406 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 C12orf65Q9H3J6 166 aaKnown RBP10.61□□□□□ -0.71
RTN3-209ENST00000538995 LDAHQ9H6V9 325 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 TNFRSF12AQ9NP84 129 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 MIEF1Q9NQG6 463 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 CCL27Q9Y4X3 112 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 ABCA12Q86UK0 2595 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 ADGRG4Q8IZF6 3080 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 NPIPA2E9PIF3 369 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 NPIPA3F8WFD2 350 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 SLC28A1O00337 649 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 AZIN1O14977 448 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 RGS14O43566 566 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 NPHS1O60500 1241 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 WDR1O75083 606 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 CHEK2O96017 543 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 ABCB1P08183 1280 aaPredicted RBP10.6□□□□□ -0.71
RTN3-209ENST00000538995 HOXD4P09016 255 aaPredicted RBP10.6□□□□□ -0.71
RTN3-209ENST00000538995 CELA3AP09093 270 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 IFI6P09912 130 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 RFPL3SP0C7P2 107 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 ELAVL4P26378 380 aaKnown RBP10.6□□□□□ -0.71
RTN3-209ENST00000538995 ACVR2AP27037 513 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 GRNP28799 593 aaKnown RBP10.6□□□□□ -0.71
RTN3-209ENST00000538995 CHRNB4P30926 498 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 NTSP30990 170 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 SERPINB5P36952 375 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 CASP3P42574 277 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 MRPS35P82673 323 aaKnown RBP10.6□□□□□ -0.71
RTN3-209ENST00000538995 PLCXD2Q0VAA5 305 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 SNTA1Q13424 505 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 GXYLT1Q4G148 440 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 WLSQ5T9L3 541 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 KANK2Q63ZY3 851 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 NOXRED1Q6NXP6 359 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 FAM180BQ6P0A1 224 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 NCCRP1Q6ZVX7 275 aaPredicted RBP10.6□□□□□ -0.71
RTN3-209ENST00000538995 NUP54Q7Z3B4 507 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 PACS2Q86VP3 889 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 SRRM1Q8IYB3 904 aaKnown RBP10.6□□□□□ -0.71
RTN3-209ENST00000538995 CCDC116Q8IYX3 515 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 MARVELD2Q8N4S9 558 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 NEIL3Q8TAT5 605 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 RND1Q92730 232 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 HGDQ93099 445 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 SDCCAG3Q96C92 435 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 OMA1Q96E52 524 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 VSTM2LQ96N03 204 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 BBS4Q96RK4 519 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 CCT7Q99832 543 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 UBQLN3Q9H347 655 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 C1orf109Q9NX04 203 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 SENP1Q9P0U3 644 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 GPR55Q9Y2T6 319 aaPredicted RBP10.6□□□□□ -0.71
RTN3-209ENST00000538995 C15orf41Q9Y2V0 281 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 HRH3Q9Y5N1 445 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 MYO9AB2RTY4 2548 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 ZNF407Q9C0G0 2248 aa10.6□□□□□ -0.71
RTN3-209ENST00000538995 A0A087WV62 115 aa10.59□□□□□ -0.71
RTN3-209ENST00000538995 OR6C70A6NIJ9 312 aa10.59□□□□□ -0.71
RTN3-209ENST00000538995 MYO1GB0I1T2 1018 aa10.59□□□□□ -0.71
RTN3-209ENST00000538995 FAM47E-STBD1D6RA91 191 aa10.59□□□□□ -0.71
RTN3-209ENST00000538995 COQ9O75208 318 aa10.59□□□□□ -0.71
RTN3-209ENST00000538995 LRATO95237 230 aa10.59□□□□□ -0.71
RTN3-209ENST00000538995 FGF4P08620 206 aa10.59□□□□□ -0.71
RTN3-209ENST00000538995 COX6B1P14854 86 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms