RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 TRMT12Q53H54 448 aaKnown RBP13.73□□□□□ -0.21
RAB40B-202ENST00000538809 SPIN4Q56A73 249 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 LIPMQ5VYY2 423 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 ACSM2BQ68CK6 577 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 DESI1Q6ICB0 168 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 LRRC25Q8N386 305 aaPredicted RBP13.73□□□□□ -0.21
RAB40B-202ENST00000538809 OR52R1Q8NGF1 315 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 CDC26Q8NHZ8 85 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 SPPL2AQ8TCT8 520 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 EXOSC8Q96B26 276 aaKnown RBP13.73□□□□□ -0.21
RAB40B-202ENST00000538809 APOPT1Q96IL0 206 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 RILPQ96NA2 401 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 UCK2Q9BZX2 261 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 ANKRA2Q9H9E1 313 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 EHD3Q9NZN3 535 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 ACAD8Q9UKU7 415 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 PLLPQ9Y342 182 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 FAM215AQ9Y5M1 114 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 ZNF780BQ9Y6R6 833 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 TLDC2A0PJX2 215 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 CCDC151A5D8V7 595 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 SUSD5O60279 629 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 HCN1O60741 890 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 TRIM3O75382 744 aaPredicted RBP13.72□□□□□ -0.21
RAB40B-202ENST00000538809 CHRNB4P30926 498 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 CEBPEQ15744 281 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 WLSQ5T9L3 541 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 TMEM198Q66K66 360 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 RTL6Q6ICC9 239 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 C10orf107Q8IVU9 208 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 MREGQ8N565 214 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 CCDC63Q8NA47 563 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 C17orf47Q8NEP4 570 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.72□□□□□ -0.21
RAB40B-202ENST00000538809 C16orf78Q8WTQ4 265 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 ASB5Q8WWX0 329 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 SARAFQ96BY9 339 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 NTNG2Q96CW9 530 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 GATA5Q9BWX5 397 aaPredicted RBP13.72□□□□□ -0.21
RAB40B-202ENST00000538809 SHCBP1LQ9BZQ2 653 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 ROPN1BQ9BZX4 212 aaPredicted RBP13.72□□□□□ -0.21
RAB40B-202ENST00000538809 ROPN1Q9HAT0 212 aaPredicted RBP13.72□□□□□ -0.21
RAB40B-202ENST00000538809 ALKBH4Q9NXW9 302 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 B4GALT7Q9UBV7 327 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.72□□□□□ -0.21
RAB40B-202ENST00000538809 PSME2Q9UL46 239 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 CCL27Q9Y4X3 112 aa13.72□□□□□ -0.21
RAB40B-202ENST00000538809 V9GYY5 206 aaPredicted RBP13.72□□□□□ -0.21
RAB40B-202ENST00000538809 PDZD2O15018 2839 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 NPIPB8E9PQR5 432 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 NME6O75414 186 aaPredicted RBP13.71□□□□□ -0.21
RAB40B-202ENST00000538809 PPM1BO75688 479 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 DRD2P14416 443 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 MASP1P48740 699 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 PLCXD2Q0VAA5 305 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 SPDYAQ5MJ70 313 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 TBCELQ5QJ74 424 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 C1orf185Q5T7R7 199 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 B3GNT6Q6ZMB0 384 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 MEX3BQ6ZN04 569 aaKnown RBP13.71□□□□□ -0.21
RAB40B-202ENST00000538809 ACAD11Q709F0 780 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 CCDC116Q8IYX3 515 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 ZNF295-AS1Q8N0V1 137 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 LIX1Q8N485 282 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 OR10Q1Q8NGQ4 319 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 OR9A2Q8NGT5 310 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 NEIL3Q8TAT5 605 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 ZNF675Q8TD23 568 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 KAT2AQ92830 837 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 OMA1Q96E52 524 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 TTYH2Q9BSA4 534 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 TMEM109Q9BVC6 243 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 QPCTLQ9NXS2 382 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 MID2Q9UJV3 735 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 CFL2Q9Y281 166 aa13.71□□□□□ -0.21
RAB40B-202ENST00000538809 MED12LQ86YW9 2145 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 CSMD2Q7Z408 3487 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 ANKRD17O75179 2603 aaKnown RBP13.7□□□□□ -0.22
RAB40B-202ENST00000538809 C15orf38-AP3S2A0A0A6YYH1 394 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 GNB5O14775 395 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 WDR1O75083 606 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 CRCPO75575 148 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 RSL1D1O76021 490 aaKnown RBP13.7□□□□□ -0.22
RAB40B-202ENST00000538809 ABCB1P08183 1280 aaPredicted RBP13.7□□□□□ -0.22
RAB40B-202ENST00000538809 ANXA4P09525 319 aaPredicted RBP13.7□□□□□ -0.22
RAB40B-202ENST00000538809 GLI4P10075 376 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 UROSP10746 265 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 PRPH2P23942 346 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 CASP3P42574 277 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 GSTM5P46439 218 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 EMDP50402 254 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 IMPG1Q17R60 797 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 PRSS53Q2L4Q9 553 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 ERCC6LQ2NKX8 1250 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 ZNF628Q5EBL2 1059 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 FNDC7Q5VTL7 733 aa13.7□□□□□ -0.22
RAB40B-202ENST00000538809 RNF165Q6ZSG1 346 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms