RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 WDR53Q7Z5U6 358 aaPredicted RBP13.17□□□□□ -0.3
LIMK1-208ENST00000538333 BTLAQ7Z6A9 289 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 ZER1Q7Z7L7 766 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 RPLP0P6Q8NHW5 317 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 CRELD1Q96HD1 420 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 FNDC11Q9BVV2 318 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 C6orf106Q9H6K1 298 aaPredicted RBP13.17□□□□□ -0.3
LIMK1-208ENST00000538333 C3orf14Q9HBI5 128 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 FAIMQ9NVQ4 179 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 TRNAU1APQ9NX07 287 aaKnown RBP13.17□□□□□ -0.3
LIMK1-208ENST00000538333 TAS2R16Q9NYV7 291 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 NTMQ9P121 344 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 ZNF780BQ9Y6R6 833 aa13.17□□□□□ -0.3
LIMK1-208ENST00000538333 SYT5O00445 386 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 AIREO43918 545 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 ENTPD6O75354 484 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 NME6O75414 186 aaPredicted RBP13.16□□□□□ -0.3
LIMK1-208ENST00000538333 SLC35G6P0C7Q6 338 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 MMP11P24347 488 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 UGT2B10P36537 528 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 YPEL5P62699 121 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.3
LIMK1-208ENST00000538333 ZNF846Q147U1 533 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 FCRL6Q6DN72 434 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 MFSD4AQ8N468 514 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 OR4K5Q8NGD3 323 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 OR6Q1Q8NGQ2 317 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 C9orf43Q8TAL5 461 aaPredicted RBP13.16□□□□□ -0.3
LIMK1-208ENST00000538333 KAT2AQ92830 837 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 TRNT1Q96Q11 434 aaKnown RBP13.16□□□□□ -0.3
LIMK1-208ENST00000538333 IL4I1Q96RQ9 567 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 HMG20AQ9NP66 347 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 POLMQ9NP87 494 aaPredicted RBP13.16□□□□□ -0.3
LIMK1-208ENST00000538333 EQTNQ9NQ60 294 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 PILRAQ9UKJ1 303 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 ERGIC3Q9Y282 383 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 CHST2Q9Y4C5 530 aa13.16□□□□□ -0.3
LIMK1-208ENST00000538333 TPST2O60704 377 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 SULT1C4O75897 302 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 ZIC2O95409 532 aaPredicted RBP13.15□□□□□ -0.3
LIMK1-208ENST00000538333 GABRG2P18507 467 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 BUD31P41223 144 aaPredicted RBP13.15□□□□□ -0.3
LIMK1-208ENST00000538333 SERPINB10P48595 397 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 CHRNEQ04844 493 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 SFSWAPQ12872 951 aaKnown RBP13.15□□□□□ -0.3
LIMK1-208ENST00000538333 COX10Q12887 443 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 DOC2BQ14184 412 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 GPR18Q14330 331 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 ARMCX4Q5H9R4 360 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 PLAG1Q6DJT9 500 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 TMCO5AQ8N6Q1 288 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 SMRP1Q8NCR6 262 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 ZG16BQ96DA0 208 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 ZHX1-C8orf76Q96EF9 292 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 SLC6A18Q96N87 628 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 DACH2Q96NX9 599 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 GPA33Q99795 319 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 WDR12Q9GZL7 423 aaKnown RBP13.15□□□□□ -0.3
LIMK1-208ENST00000538333 DCSTAMPQ9H295 470 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 ZBTB20Q9HC78 741 aaPredicted RBP13.15□□□□□ -0.3
LIMK1-208ENST00000538333 LIPT1Q9Y234 373 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 LRRC72A6NJI9 287 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 H3BN98 237 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 PFDN1O60925 122 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 POLR2CP19387 275 aaPredicted RBP13.15□□□□□ -0.3
LIMK1-208ENST00000538333 RGS6P49758 472 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 CLK1P49759 484 aaKnown RBP13.15□□□□□ -0.3
LIMK1-208ENST00000538333 RAB15P59190 212 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 RUNX2Q13950 521 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 C1orf94Q6P1W5 598 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 FIGLAQ6QHK4 219 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 FAM111BQ6SJ93 734 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 DCDC5Q6ZRR9 648 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 ZNF367Q7RTV3 350 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 ADCK1Q86TW2 530 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 LINC00471Q8N535 108 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 OR7G2Q8NG99 324 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 CHPT1Q8WUD6 406 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 S100ZQ8WXG8 99 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 OR5M11Q96RB7 305 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 SERINC2Q96SA4 455 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 ARHGDIGQ99819 225 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 ACTRT3Q9BYD9 372 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 C8orf33Q9H7E9 229 aaPredicted RBP13.15□□□□□ -0.3
LIMK1-208ENST00000538333 DNAAF2Q9NVR5 837 aaKnown RBP13.15□□□□□ -0.3
LIMK1-208ENST00000538333 TBCCD1Q9NVR7 557 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 GIN1Q9NXP7 522 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 ACTR10Q9NZ32 417 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 PCDHGA3Q9Y5H0 932 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 SCN2AQ99250 2005 aa13.15□□□□□ -0.3
LIMK1-208ENST00000538333 TCRBV21S2A2A0A5A6 115 aa13.14□□□□□ -0.31
LIMK1-208ENST00000538333 SHISA7A6NL88 538 aa13.14□□□□□ -0.31
LIMK1-208ENST00000538333 DNAJB6O75190 326 aa13.14□□□□□ -0.31
LIMK1-208ENST00000538333 AKT2P31751 481 aa13.14□□□□□ -0.31
LIMK1-208ENST00000538333 SOX18P35713 384 aa13.14□□□□□ -0.31
LIMK1-208ENST00000538333 TUBA1BP68363 451 aa13.14□□□□□ -0.31
LIMK1-208ENST00000538333 OLR1P78380 273 aa13.14□□□□□ -0.31
LIMK1-208ENST00000538333 SUZ12Q15022 739 aaKnown RBP13.14□□□□□ -0.31
LIMK1-208ENST00000538333 NDUFA9Q16795 377 aa13.14□□□□□ -0.31
LIMK1-208ENST00000538333 ZNF311Q5JNZ3 666 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms