RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SUN3Q8TAQ9 357 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 CAPSLQ8WWF8 208 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 ZNF486Q96H40 463 aaPredicted RBP13.49□□□□□ -0.25
USP44-203ENST00000537435 PRR14Q9BWN1 585 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 MOV10Q9HCE1 1003 aaKnown RBP13.49□□□□□ -0.25
USP44-203ENST00000537435 TIGARQ9NQ88 270 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 IMP3Q9NV31 184 aaKnown RBP13.49□□□□□ -0.25
USP44-203ENST00000537435 C4orf51C9J302 202 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 IL1AP01583 271 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 RCVRNP35243 200 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 BCL6P41182 706 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 HTR3AP46098 478 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 RFX2P48378 723 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 GAS1P54826 345 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 WNT4P56705 351 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 DUSP2Q05923 314 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 HNRNPA0Q13151 305 aaKnown RBP13.48□□□□□ -0.25
USP44-203ENST00000537435 SLAMF1Q13291 335 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 CAMK1Q14012 370 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 ZNF544Q6NX49 715 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 TMEM64Q6YI46 380 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 UBQLNLQ8IYU4 475 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 C16orf58Q96GQ5 468 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 ABCB9Q9NP78 766 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 NPAP1Q9NZP6 1156 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 YARS2Q9Y2Z4 477 aaKnown RBP13.48□□□□□ -0.25
USP44-203ENST00000537435 PCDHGB2Q9Y5G2 931 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 KCNE3Q9Y6H6 103 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 A0A087WUU8 490 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 LINC00854A0A1B0GVQ3 168 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 AP3D1O14617 1153 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 ERI3O43414 337 aaKnown RBP13.48□□□□□ -0.25
USP44-203ENST00000537435 KRT8P05787 483 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 TSPAN19P0C672 248 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 MSL3P1P0C860 447 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 C8orf89P0DMQ9 161 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 NR2F6P10588 404 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 IL7P13232 177 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
USP44-203ENST00000537435 GSTM3P21266 225 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 DRD3P35462 400 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 ANXA11P50995 505 aaKnown RBP13.48□□□□□ -0.25
USP44-203ENST00000537435 COPZ1P61923 177 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 BNC1Q01954 994 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 GPR50Q13585 617 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 KLHL22Q53GT1 634 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 C3orf38Q5JPI3 329 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 FAM78AQ5JUQ0 283 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 ZNF362Q5T0B9 420 aaPredicted RBP13.48□□□□□ -0.25
USP44-203ENST00000537435 TMEM107Q6UX40 140 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 C11orf74Q86VG3 221 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 LAPTM4BQ86VI4 370 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 SLC7A5P1Q8MH63 180 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 C12orf76Q8N812 135 aaPredicted RBP13.48□□□□□ -0.25
USP44-203ENST00000537435 ZNF513Q8N8E2 541 aaPredicted RBP13.48□□□□□ -0.25
USP44-203ENST00000537435 TTLQ8NG68 377 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 SLC9A6Q92581 669 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 CNRIP1Q96F85 164 aaPredicted RBP13.48□□□□□ -0.25
USP44-203ENST00000537435 CAMK1GQ96NX5 476 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 PINK1Q9BXM7 581 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 ACSL5Q9ULC5 683 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 GPR52Q9Y2T5 361 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 ATG4BQ9Y4P1 393 aa13.48□□□□□ -0.25
USP44-203ENST00000537435 A0A0G2JPF8 293 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 A0A1W2PR48 441 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 A0A1W2PS29 197 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 HNRNPCL2B2RXH8 293 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 HNRNPCL3B7ZW38 293 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 CASC3O15234 703 aaKnown RBP13.47□□□□□ -0.25
USP44-203ENST00000537435 LRRTM2O43300 516 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 HNRNPCL4P0DMR1 293 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 ACP2P11117 423 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 RAB28P51157 221 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 TAS2R41P59536 307 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 RPS25P62851 125 aaKnown RBP13.47□□□□□ -0.25
USP44-203ENST00000537435 IFITM2Q01629 132 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 GNA13Q14344 377 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 TAB1Q15750 504 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 TMEM35AQ53FP2 167 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 BHLHB9Q6PI77 547 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 FAM131AQ6UXB0 335 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 ZNF517Q6ZMY9 492 aaPredicted RBP13.47□□□□□ -0.25
USP44-203ENST00000537435 GALNT6Q8NCL4 622 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 TEX47Q8TBZ9 253 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 TMEM163Q8TC26 289 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 GATAD2BQ8WXI9 593 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 SMG7Q92540 1137 aaKnown RBP13.47□□□□□ -0.25
USP44-203ENST00000537435 TM9SF4Q92544 642 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 RNFT2Q96EX2 444 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 SAP130Q9H0E3 1048 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 C11orf49Q9H6J7 331 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 ZNF221Q9UK13 617 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 KCNK6Q9Y257 313 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 GRIP1Q9Y3R0 1128 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 ASB4Q9Y574 426 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 MUC22E2RYF6 1773 aaPredicted RBP13.47□□□□□ -0.25
USP44-203ENST00000537435 A0A1W2PQ09 198 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 PRODHO43272 600 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 FRS3O43559 492 aa13.47□□□□□ -0.25
USP44-203ENST00000537435 HIST1H1TP22492 207 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms