RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 RPS17P08708 135 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 GALNT1Q10472 559 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 EXOSC7Q15024 291 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SLC30A6Q6NXT4 461 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TMEM81Q6P7N7 255 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ANGPTL8Q6UXH0 198 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 RPS27LQ71UM5 84 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FAM83FQ8NEG4 500 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SELENOMQ8WWX9 145 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 HGDQ93099 445 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TM4SF18Q96CE8 201 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 LCORQ96JN0 433 aaPredicted RBP17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 PAFAH2Q99487 392 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 MRPL57Q9BQC6 102 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TMUB1Q9BVT8 246 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ITPAQ9BY32 194 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TSPYL1Q9H0U9 437 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 MRPL46Q9H2W6 279 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 EPB41L4BQ9H329 900 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CDC42EP4Q9H3Q1 356 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 BRF2Q9HAW0 419 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NMRK1Q9NWW6 199 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FETUBQ9UGM5 382 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SNX6Q9UNH7 406 aa17.96■□□□□ 0.47
TNFRSF1B-204ENST00000536782 A0A1B0GTL3 188 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MBD3L4A6NDZ8 208 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MBD3L3A6NE82 208 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MBD3L5A6NJ08 208 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ACOX3O15254 700 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ACTL6AO96019 429 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 GCKP35557 465 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 NAGLUP54802 743 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PLCXD2Q0VAA5 305 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 RCAN2Q14206 197 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DCST1Q5T197 706 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 YRDCQ86U90 279 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CDC20BQ86Y33 519 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 KIF18BQ86Y91 864 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MMP21Q8N119 569 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MBD3L2Q8NHZ7 208 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ZNF483Q8TF39 744 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 KLHL29Q96CT2 875 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TRIM44Q96DX7 344 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 OMA1Q96E52 524 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 NODALQ96S42 347 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 FAIM2Q9BWQ8 316 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 OSBPL11Q9BXB4 747 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CALHM2Q9HA72 323 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ZNF639Q9UID6 485 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CBLCQ9ULV8 474 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DOCK7Q96N67 2140 aa17.95■□□□□ 0.46
TNFRSF1B-204ENST00000536782 VPS13CQ709C8 3753 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TUBAL3A6NHL2 446 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PPP6CO00743 305 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 SNPHO15079 494 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ICOSLGO75144 302 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 RHOXF2BP0C7M4 288 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DNASE1P24855 282 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TACR1P25103 407 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CTSSP25774 331 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CNTFP26441 200 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 OPRM1P35372 400 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CDH13P55290 713 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DCAF7P61962 342 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TRA2BP62995 288 aaKnown RBP17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 SNTA1Q13424 505 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DAZAP2Q15038 168 aaPredicted RBP17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CEBPEQ15744 281 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DESI1Q6ICB0 168 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 LETMD1Q6P1Q0 360 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TGIF2LYQ8IUE0 185 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 MNS1Q8NEH6 495 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ADCY4Q8NFM4 1077 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 OR52R1Q8NGF1 315 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ZNF592Q92610 1267 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CTHRC1Q96CG8 243 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 C1QTNF3Q9BXJ4 246 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 KLRF1Q9NZS2 232 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PRODH2Q9UF12 536 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PLLPQ9Y342 182 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ZNF780BQ9Y6R6 833 aa17.94■□□□□ 0.46
TNFRSF1B-204ENST00000536782 C2orf72A6NCS6 295 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 A8MT66 165 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TRIM49D1C9J1S8 452 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 POC1B-GALNT4F8VUJ3 575 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DIAPH2O60879 1101 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CBX7O95931 251 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 IL18BPO95998 194 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 CYP4B1P13584 511 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TSPAN8P19075 237 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 DRD5P21918 477 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PTGDSP41222 190 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PPICP45877 212 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 ALDH9A1P49189 494 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 AGFG1P52594 562 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 PPP2R2AP63151 447 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 KRTAP21-3Q3LHN1 58 aa17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 TRMT12Q53H54 448 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 C1orf52Q8N6N3 182 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1B-204ENST00000536782 SIMC1Q8NDZ2 872 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms