RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 A8MZ25 164 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 CACNB4O00305 520 aaPredicted RBP4.88□□□□□ -1.63
CLIP1-207ENST00000536634 POLR1CO15160 346 aaPredicted RBP4.88□□□□□ -1.63
CLIP1-207ENST00000536634 SMAD9O15198 467 aaKnown RBP4.88□□□□□ -1.63
CLIP1-207ENST00000536634 STX10O60499 249 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 CREG1O75629 220 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 RECQL5O94762 991 aaPredicted RBP4.88□□□□□ -1.63
CLIP1-207ENST00000536634 KIAA0754O94854 1291 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 YEATS4O95619 227 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 POP4O95707 220 aaKnown RBP4.88□□□□□ -1.63
CLIP1-207ENST00000536634 EML2O95834 649 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF23P17027 643 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 TRIM23P36406 574 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 CDKN1AP38936 164 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 GNPDA1P46926 289 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 LEPRP48357 1165 aaKnown RBP4.88□□□□□ -1.63
CLIP1-207ENST00000536634 CCL11P51671 97 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 GPR143P51810 404 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 CD81P60033 236 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 SNRPD1P62314 119 aaKnown RBP4.88□□□□□ -1.63
CLIP1-207ENST00000536634 RALGDSQ12967 914 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 CUL4AQ13619 759 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 UGP2Q16851 508 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 BRMS1LQ5PSV4 323 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 CCNYL2Q5T2Q4 361 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 KLHL35Q6PF15 583 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 IKBIPQ70UQ0 350 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 GUF1Q8N442 669 aaKnown RBP4.88□□□□□ -1.63
CLIP1-207ENST00000536634 GBGT1Q8N5D6 347 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 SLC37A2Q8TED4 501 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 CT55Q8WUE5 264 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 FBXO17Q96EF6 278 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 OR2A14Q96R47 310 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 NPY6RQ99463 290 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 NUDT9Q9BW91 350 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 GSDMCQ9BYG8 508 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 ACTL8Q9H568 366 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 AKIRIN1Q9H9L7 192 aaPredicted RBP4.88□□□□□ -1.63
CLIP1-207ENST00000536634 ASF1BQ9NVP2 202 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 FAM118AQ9NWS6 357 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 NEU3Q9UQ49 428 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 PIKFYVEQ9Y2I7 2098 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 SEC16AO15027 2179 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 AKAP6Q13023 2319 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 FER1L5A0AVI2 2057 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 ANK2Q01484 3957 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 ATRQ13535 2644 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 CACNA1CQ13936 2221 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 PGPEP1LA6NFU8 196 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 ZSCAN5CA6NGD5 496 aaPredicted RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 CETN3O15182 167 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 OGG1O15527 345 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 PRKNO60260 465 aaPredicted RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 ZG16O60844 167 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 LETM1O95202 739 aaPredicted RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 HOXC4P09017 264 aaPredicted RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 KRT5P13647 590 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 SELLP14151 372 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 CASP14P31944 242 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 PPARGP37231 505 aaPredicted RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 MSH2P43246 934 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 SULT1E1P49888 294 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 GFERP55789 205 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 ELP6Q0PNE2 266 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 NFATC2Q13469 925 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 CHRNA6Q15825 494 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 MEA1Q16626 185 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 PTPN20Q4JDL3 420 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 FAAH2Q6GMR7 532 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 KIAA0930Q6ICG6 404 aaPredicted RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 FAM180BQ6P0A1 224 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 WDR74Q6RFH5 385 aaPredicted RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 LRRC31Q6UY01 552 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 C11orf57Q6ZUT1 292 aaPredicted RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 SLC47A2Q86VL8 602 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 NLRP14Q86W24 1093 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 CEP97Q8IW35 865 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 GCSAMQ8N6F7 178 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 PAF1Q8N7H5 531 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 C1orf131Q8NDD1 294 aaKnown RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 FDCSPQ8NFU4 85 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF606Q8WXB4 792 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 NT5C3BQ969T7 300 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 PNPLA2Q96AD5 504 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 STAMBPL1Q96FJ0 436 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 ELMO2Q96JJ3 720 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 NSMCE3Q96MG7 304 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 CMTM3Q96MX0 182 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 GDAP1L1Q96MZ0 367 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 ZYG11BQ9C0D3 744 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 ING2Q9H160 280 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 PLK3Q9H4B4 646 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF696Q9H7X3 374 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 KRT84Q9NSB2 600 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 LHX3Q9UBR4 397 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 NTNG1Q9Y2I2 539 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 MFHAS1Q9Y4C4 1052 aa4.87□□□□□ -1.63
CLIP1-207ENST00000536634 PCYT1BQ9Y5K3 369 aaPredicted RBP4.87□□□□□ -1.63
CLIP1-207ENST00000536634 FBN1P35555 2871 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms