RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 SOX3P41225 446 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 TNNT3P45378 269 aaPredicted RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 SLCO1A2P46721 670 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 HTR6P50406 440 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 FKBP3Q00688 224 aaKnown RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 PLOD1Q02809 727 aaPredicted RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 NIPAL4Q0D2K0 466 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 KIF5AQ12840 1032 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 RPA4Q13156 261 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 HLXQ14774 488 aaPredicted RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 PDCD1Q15116 288 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 SYTL3Q4VX76 610 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 ZCWPW2Q504Y3 356 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 XKR6Q5GH73 641 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 CT83Q5H943 113 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 DEFB121Q5J5C9 76 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 PLAC9Q5JTB6 97 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 ZNF474Q6S9Z5 364 aaPredicted RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 SCIMPQ6UWF3 145 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 GRAMD2AQ8IUY3 354 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 ADGRG5Q8IZF4 528 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 TEX26Q8N6G2 289 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 ZDHHC22Q8N966 263 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 PLPP5Q8NEB5 264 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 OR5K2Q8NHB8 316 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 LILRB1Q8NHL6 650 aaPredicted RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 CFAP61Q8NHU2 1237 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 GABPB2Q8TAK5 448 aaPredicted RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 SYN2Q92777 582 aaPredicted RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 ABTB1Q969K4 478 aaPredicted RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 SGCZQ96LD1 299 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 IL17FQ96PD4 163 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 DUX5Q96PT3 197 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 USP28Q96RU2 1077 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 SLC6A7Q99884 636 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 RBM4BQ9BQ04 359 aaKnown RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 C1QTNF5Q9BXJ0 243 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 HIPK2Q9H2X6 1198 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 ARNT2Q9HBZ2 717 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 NGBQ9NPG2 151 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 ESM1Q9NQ30 184 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 EIF2B3Q9NR50 452 aaKnown RBP3.49□□□□□ -1.85
YBX3-205ENST00000536107 PCSK1NQ9UHG2 260 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 CRLS1Q9UJA2 301 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 PKP3Q9Y446 797 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 ATG4BQ9Y4P1 393 aa3.49□□□□□ -1.85
YBX3-205ENST00000536107 ZNF407Q9C0G0 2248 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 LCE6AA0A183 80 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 SYCE3A1L190 88 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 SAGE2PA6NJ88 616 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 NDUFS8O00217 210 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 PMM2O15305 246 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 FRS3O43559 492 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 TNFSF13O75888 250 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 LY6HO94772 140 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 MYO1DO94832 1006 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 GAS8-AS1O95177 125 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 LSM8O95777 96 aaKnown RBP3.48□□□□□ -1.85
YBX3-205ENST00000536107 FHP07954 510 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 PNMA6AP0CW24 399 aaPredicted RBP3.48□□□□□ -1.85
YBX3-205ENST00000536107 TPBGLP0DKB5 382 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 CCL3P10147 92 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 MDKP21741 143 aaPredicted RBP3.48□□□□□ -1.85
YBX3-205ENST00000536107 OMGP23515 440 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 PTPN3P26045 913 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 PKLRP30613 574 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 PCK1P35558 622 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 RPL21P46778 160 aaKnown RBP3.48□□□□□ -1.85
YBX3-205ENST00000536107 PCYT1AP49585 367 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 PRLHRP49683 370 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 ANXA11P50995 505 aaKnown RBP3.48□□□□□ -1.85
YBX3-205ENST00000536107 EFNA4P52798 201 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 CSE1LP55060 971 aaKnown RBP3.48□□□□□ -1.85
YBX3-205ENST00000536107 RHAGQ02094 409 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 TSTA3Q13630 321 aaPredicted RBP3.48□□□□□ -1.85
YBX3-205ENST00000536107 FAM53BQ14153 422 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 DOC2AQ14183 400 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 CYP1B1Q16678 543 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 PHKG1Q16816 387 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 DMRTC1Q5HYR2 192 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 PRAMEF20Q5VT98 475 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 SLC22A10Q63ZE4 541 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 FAHD2BQ6P2I3 314 aaPredicted RBP3.48□□□□□ -1.85
YBX3-205ENST00000536107 LEG1Q6P5S2 330 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 DEF8Q6ZN54 512 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 CLEC17AQ6ZS10 378 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 RNF44Q7L0R7 432 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 CHMP1BQ7LBR1 199 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 ADCK2Q7Z695 626 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 CREBRFQ8IUR6 639 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 RAB42Q8N4Z0 105 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 TEX29Q8N6K0 151 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 LINC01555Q8NAE3 123 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 ZNF540Q8NDQ6 660 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 B3GNT7Q8NFL0 401 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 KBTBD8Q8NFY9 601 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 ARRDC2Q8TBH0 407 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 ZPLD1Q8TCW7 415 aa3.48□□□□□ -1.85
YBX3-205ENST00000536107 HOXB13Q92826 284 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms