RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TGM3Q08188 693 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SIGLEC14Q08ET2 396 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 KEAP1Q14145 624 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SKIV2LQ15477 1246 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 NEDD8Q15843 81 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF691Q5VV52 312 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 GARNL3Q5VVW2 1013 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 REEP3Q6NUK4 255 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 PRSS41Q7RTY9 318 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 AKAP14Q86UN6 197 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 CYP4Z1Q86W10 505 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 HIPK1Q86Z02 1210 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 OR56A1Q8NGH5 318 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 NFKBIDQ8NI38 313 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 FBXO30Q8TB52 745 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 PPWD1Q96BP3 646 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 SLC41A2Q96JW4 573 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 HSPA12BQ96MM6 686 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 RBM4BQ9BQ04 359 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 RBM4Q9BWF3 364 aaKnown RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.5□□□□□ -1.21
COL21A1-212ENST00000535941 MIEF1Q9NQG6 463 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 C5AR2Q9P296 337 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 RNF215Q9Y6U7 377 aa7.5□□□□□ -1.21
COL21A1-212ENST00000535941 VCANP13611 3396 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 TLCD2A6NGC4 264 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 CCRL2O00421 344 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 PRAMEF10O60809 474 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 FHP07954 510 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 CCNA2P20248 432 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 EFNA1P20827 205 aaPredicted RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 ACVR2AP27037 513 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 DNAJA1P31689 397 aaKnown RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 NR4A2P43354 598 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 PLA2G16P53816 162 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 HNRNPKP61978 463 aaKnown RBP eCLIP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 PLAURQ03405 335 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 EPS8Q12929 822 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 DNASE1L3Q13609 305 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 NPTX1Q15818 432 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 TAF8Q7Z7C8 310 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 ARMC8Q8IUR7 673 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 OR4D11Q8NGI4 311 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 PMM1Q92871 262 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 LMF2Q9BU23 707 aaKnown RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 MOV10Q9HCE1 1003 aaKnown RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 GIMAP4Q9NUV9 329 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 HRASLS2Q9NWW9 162 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 NDRG4Q9ULP0 352 aaKnown RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 HSPE1-MOB4S4R3N1 261 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 M0QX08 132 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 TOX3O15405 576 aaPredicted RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 EMC8O43402 210 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 MAN1A2O60476 641 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 SNAP29O95721 258 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 CST1P01037 141 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 TP53P04637 393 aaPredicted RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 CHRM4P08173 479 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 ALOX12P18054 663 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 CSF2RBP32927 897 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 KRT33BQ14525 404 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 OXA1LQ15070 435 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 GPR19Q15760 415 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF528Q3MIS6 628 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 CCDC58Q4VC31 144 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF542PQ5EBM4 170 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 ZCCHC12Q6PEW1 402 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 FAM111BQ6SJ93 734 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 DBX2Q6ZNG2 339 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 SAMD14Q8IZD0 417 aaPredicted RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 D2HGDHQ8N465 521 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 MAFAQ8NHW3 353 aaPredicted RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 BBS10Q8TAM1 723 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 ADAMTS18Q8TE60 1221 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 ZNF300Q96RE9 604 aaPredicted RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 SEPHS2Q99611 448 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 CAPN10Q9HC96 672 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 ACER3Q9NUN7 267 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 FKBP14Q9NWM8 211 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 NLGN3Q9NZ94 848 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 C19orf53Q9UNZ5 99 aaPredicted RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 B3GNT3Q9Y2A9 372 aa7.49□□□□□ -1.21
COL21A1-212ENST00000535941 MAGED1Q9Y5V3 778 aaPredicted RBP7.49□□□□□ -1.21
COL21A1-212ENST00000535941 IGHV1OR21-1A0A087WYE8 117 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 IGKV3D-11A0A0A0MRZ8 115 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 URADA6NGE7 173 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 SAC3D1A6NKF1 404 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 G3V2T6 193 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 SYT5O00445 386 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 GSTA4O15217 222 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 BCAT2O15382 392 aaPredicted RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 NSA2O95478 260 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 PRKACAP17612 351 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 GABRB1P18505 474 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 PIGAP37287 484 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CCT3P49368 545 aaKnown RBP7.48□□□□□ -1.21
COL21A1-212ENST00000535941 KCNC4Q03721 635 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 MLIPQ5VWP3 458 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CDC73Q6P1J9 531 aa7.48□□□□□ -1.21
COL21A1-212ENST00000535941 CD300LDQ6UXZ3 194 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms