RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 MAGEA12P43365 314 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 AGFG1P52594 562 aaKnown RBP18.8■□□□□ 0.6
LTBR-205ENST00000535739 MGAT2Q10469 447 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 CEBPEQ15744 281 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 PRICKLE4Q2TBC4 344 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 NHSL2Q5HYW2 709 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 TIGD3Q6B0B8 471 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 SLC48A1Q6P1K1 146 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 CDC20BQ86Y33 519 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 SIMC1Q8NDZ2 872 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 FAM222BQ8WU58 562 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 SLC44A1Q8WWI5 657 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 ABTB1Q969K4 478 aaPredicted RBP18.8■□□□□ 0.6
LTBR-205ENST00000535739 ISL2Q96A47 359 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 RMND5BQ96G75 393 aaPredicted RBP18.8■□□□□ 0.6
LTBR-205ENST00000535739 FMO2Q99518 471 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 ITPAQ9BY32 194 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 ELOVL6Q9H5J4 265 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 METTL7AQ9H8H3 244 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 BCAP29Q9UHQ4 241 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 CBLCQ9ULV8 474 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 TMCO1Q9UM00 188 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 SLC12A4Q9UP95 1085 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 PLEKHA6Q9Y2H5 1048 aa18.8■□□□□ 0.6
LTBR-205ENST00000535739 FLNAP21333 2647 aaKnown RBP18.79■□□□□ 0.6
LTBR-205ENST00000535739 C1orf226A1L170 272 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 C2orf72A6NCS6 295 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 PPP6CO00743 305 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 SMIM24O75264 130 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 ERAL1O75616 437 aaKnown RBP18.79■□□□□ 0.6
LTBR-205ENST00000535739 PPM1BO75688 479 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 PDYNP01213 254 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 TACR1P25103 407 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 NAGLUP54802 743 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 DUSP2Q05923 314 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 GALNT1Q10472 559 aaPredicted RBP18.79■□□□□ 0.6
LTBR-205ENST00000535739 MAP4K2Q12851 820 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 SF3B4Q15427 424 aaKnown RBP eCLIP18.79■□□□□ 0.63e-8■■■■■ 27.2
LTBR-205ENST00000535739 GGTA1PQ4G0N0 100 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 C10orf62Q5T681 223 aaPredicted RBP18.79■□□□□ 0.6
LTBR-205ENST00000535739 FAM180BQ6P0A1 224 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 ANGPTL8Q6UXH0 198 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 YRDCQ86U90 279 aaKnown RBP18.79■□□□□ 0.6
LTBR-205ENST00000535739 TGIF2LYQ8IUE0 185 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 FAM83FQ8NEG4 500 aaPredicted RBP18.79■□□□□ 0.6
LTBR-205ENST00000535739 ADCY4Q8NFM4 1077 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 OR1J4Q8NGS1 313 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 GOT1L1Q8NHS2 421 aaPredicted RBP18.79■□□□□ 0.6
LTBR-205ENST00000535739 TRPC4APQ8TEL6 797 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 HGDQ93099 445 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 NODALQ96S42 347 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 MAT2BQ9NZL9 334 aa18.79■□□□□ 0.6
LTBR-205ENST00000535739 GOLGA6L10A6NI86 522 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 CD8B2A6NJW9 211 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 INHBAP08476 426 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 TSPAN8P19075 237 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 SOX18P35713 384 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 PTGDSP41222 190 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 LETMD1Q6P1Q0 360 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 GSPT2Q8IYD1 628 aaKnown RBP18.78■□□□□ 0.6
LTBR-205ENST00000535739 CHDHQ8NE62 594 aaPredicted RBP18.78■□□□□ 0.6
LTBR-205ENST00000535739 TM4SF18Q96CE8 201 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 OMA1Q96E52 524 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 GALNT9Q9HCQ5 603 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 EHD3Q9NZN3 535 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 ZNF639Q9UID6 485 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 FOXD3Q9UJU5 478 aaPredicted RBP18.78■□□□□ 0.6
LTBR-205ENST00000535739 CFL2Q9Y281 166 aa18.78■□□□□ 0.6
LTBR-205ENST00000535739 MBD3L4A6NDZ8 208 aaPredicted RBP18.77■□□□□ 0.6
LTBR-205ENST00000535739 MBD3L3A6NE82 208 aaPredicted RBP18.77■□□□□ 0.6
LTBR-205ENST00000535739 MBD3L5A6NJ08 208 aaPredicted RBP18.77■□□□□ 0.6
LTBR-205ENST00000535739 ICOSLGO75144 302 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 CDH16O75309 829 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 GUCY1B2O75343 617 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 ATP1B1P05026 303 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 RPS17P08708 135 aaKnown RBP18.77■□□□□ 0.6
LTBR-205ENST00000535739 NAGAP17050 411 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 CSNK2A2P19784 350 aaPredicted RBP18.77■□□□□ 0.6
LTBR-205ENST00000535739 DNASE1P24855 282 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 CTSSP25774 331 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 CNTFP26441 200 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 CDH13P55290 713 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 TSNAXIP1Q2TAA8 658 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 TRMT12Q53H54 448 aaKnown RBP18.77■□□□□ 0.6
LTBR-205ENST00000535739 NUP54Q7Z3B4 507 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 C9orf106Q8NAJ2 232 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 MBD3L2Q8NHZ7 208 aaPredicted RBP18.77■□□□□ 0.6
LTBR-205ENST00000535739 ZNF483Q8TF39 744 aaPredicted RBP18.77■□□□□ 0.6
LTBR-205ENST00000535739 SELENOMQ8WWX9 145 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 KLHL29Q96CT2 875 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 LCORQ96JN0 433 aaPredicted RBP18.77■□□□□ 0.6
LTBR-205ENST00000535739 HBEGFQ99075 208 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 PAFAH2Q99487 392 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 OSBPL11Q9BXB4 747 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 FUT8Q9BYC5 575 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 CDC42EP4Q9H3Q1 356 aaKnown RBP18.77■□□□□ 0.6
LTBR-205ENST00000535739 CALHM2Q9HA72 323 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 MAPRE3Q9UPY8 281 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 PLLPQ9Y342 182 aa18.77■□□□□ 0.6
LTBR-205ENST00000535739 TUBAL3A6NHL2 446 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms