RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 ARFIP2P53365 341 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 SRSF11Q05519 484 aaKnown RBP11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 RAPSNQ13702 412 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 SPANXN4Q5MJ08 99 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 METTL21CQ5VZV1 264 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 OR4F3Q6IEY1 312 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 PAOXQ6QHF9 649 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 IGFL2Q6UWQ7 119 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 LRRC74BQ6ZQY2 392 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 FUNDC1Q8IVP5 155 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 C9orf40Q8IXQ3 194 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 SIRT6Q8N6T7 355 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 OR7G2Q8NG99 324 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 OR7G1Q8NGA0 311 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 OR9I1Q8NGQ6 314 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 PSMA8Q8TAA3 256 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 NRG4Q8WWG1 115 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 KAT2AQ92830 837 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 ERP27Q96DN0 273 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 ABHD17AQ96GS6 310 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 PRPF18Q99633 342 aaKnown RBP11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 ZNF184Q99676 751 aaPredicted RBP11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 ADNPQ9H2P0 1102 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 ANKRA2Q9H9E1 313 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 SIRT3Q9NTG7 399 aaPredicted RBP11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 ATAD3AQ9NVI7 634 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 TUBD1Q9UJT1 453 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 CACNA1GO43497 2377 aa11.81□□□□□ -0.52
RPUSD4-208ENST00000533628 ERVH48-1M5A8F1 160 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 DYRK3O43781 588 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 SLC22A3O75751 556 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 ZFAND5O76080 213 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 DDX5P17844 614 aaKnown RBP11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 CDK9P50750 372 aaKnown RBP11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 RNF4P78317 190 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 KCNAB2Q13303 367 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 RPS6KA2Q15349 733 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 PGS1Q32NB8 556 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 CRB2Q5IJ48 1285 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 FCRLBQ6BAA4 426 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 HSDL2Q6YN16 418 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 MIER2Q8N344 545 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 GLB1L3Q8NCI6 653 aaPredicted RBP11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 OR5P2Q8WZ92 322 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 SLC7A6OSQ96CW6 309 aaPredicted RBP11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 ELP4Q96EB1 424 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 ZBED6CLQ96FA7 236 aaPredicted RBP11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 WBP1Q96G27 269 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 RILPQ96NA2 401 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 SLC25A23Q9BV35 468 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 MYLK2Q9H1R3 596 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 OR10A5Q9H207 317 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 ZBTB20Q9HC78 741 aaPredicted RBP11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 SLC52A3Q9NQ40 469 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 NTMQ9P121 344 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 PTGFRNQ9P2B2 879 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 LHX6Q9UPM6 363 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 CPAMD8Q8IZJ3 1885 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 A0A087WV62 115 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 A0A1W2PRB8 838 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 SLITRK5O94991 958 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 PSMG1O95456 288 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 KIR3DL1P43629 444 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 DGKQP52824 942 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 MANFP55145 182 aaKnown RBP11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 SLC34A1Q06495 639 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 EXOSC7Q15024 291 aaKnown RBP11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 DPY19L1Q2PZI1 675 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 FAM174BQ3ZCQ3 159 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 SPATA24Q86W54 205 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 LGI4Q8N135 537 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 CPSF7Q8N684 471 aaKnown RBP11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 ZNF441Q8N8Z8 693 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 DEFB126Q9BYW3 111 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 TBCCD1Q9NVR7 557 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 TMEM45AQ9NWC5 275 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 PTTG2Q9NZH5 202 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 COPS7AQ9UBW8 275 aa11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 C19orf53Q9UNZ5 99 aaPredicted RBP11.8□□□□□ -0.52
RPUSD4-208ENST00000533628 OR6C76A6NM76 312 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 MKRN2OSH3BPM6 223 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 UPK1AO00322 258 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 RNASET2O00584 256 aaKnown RBP11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 HNRNPCL1O60812 293 aaKnown RBP11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 C6orf47O95873 294 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 MC3RP41968 323 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 EMDP50402 254 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 MLF1P58340 268 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 HSPB3Q12988 150 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 MFAP5Q13361 173 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 SQLEQ14534 574 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 EBPQ15125 230 aaKnown RBP11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 AGAP7PQ5VUJ5 663 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 TCTN3Q6NUS6 607 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 TMEM107Q6UX40 140 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 RNF111Q6ZNA4 994 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 C16orf47Q6ZP98 133 aaPredicted RBP11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 RPS19BP1Q86WX3 136 aaKnown RBP11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 SLC15A3Q8IY34 581 aa11.79□□□□□ -0.52
RPUSD4-208ENST00000533628 CLECL1Q8IZS7 167 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms