RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 TMEM114B3SHH9 223 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 PEX11AO75192 247 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 ITGA10O75578 1167 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 ATP6AP2O75787 350 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 RSL1D1O76021 490 aaKnown RBP8.04□□□□□ -1.12
COPB1-210ENST00000533533 ZFAND5O76080 213 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 FGF4P08620 206 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 CD99P14209 185 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 GRK2P25098 689 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 NUP107P57740 925 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 TRA2BP62995 288 aaKnown RBP8.04□□□□□ -1.12
COPB1-210ENST00000533533 ERVK-8P63133 956 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 RAE1P78406 368 aaKnown RBP8.04□□□□□ -1.12
COPB1-210ENST00000533533 ZNF763Q0D2J5 394 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 PMPCAQ10713 525 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 BIKQ13323 160 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 HEPACAMQ14CZ8 416 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 TERF2Q15554 542 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 PDCD2Q16342 344 aaPredicted RBP8.04□□□□□ -1.12
COPB1-210ENST00000533533 ZNF750Q32MQ0 723 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 NOXRED1Q6NXP6 359 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 SLC48A1Q6P1K1 146 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 HSDL2Q6YN16 418 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 DGAT2L6Q6ZPD8 337 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 ACAD11Q709F0 780 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 TRIM46Q7Z4K8 759 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 ST13P4Q8IZP2 240 aaPredicted RBP8.04□□□□□ -1.12
COPB1-210ENST00000533533 ZNF781Q8N8C0 355 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 ZNF321PQ8N8H1 164 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 MORN4Q8NDC4 146 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 SLC2A12Q8TD20 617 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 PTPMT1Q8WUK0 201 aaPredicted RBP8.04□□□□□ -1.12
COPB1-210ENST00000533533 NRGNQ92686 78 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 RIT1Q92963 219 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 GFM2Q969S9 779 aaKnown RBP8.04□□□□□ -1.12
COPB1-210ENST00000533533 ZDHHC16Q969W1 377 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 EXOSC8Q96B26 276 aaKnown RBP8.04□□□□□ -1.12
COPB1-210ENST00000533533 TLCD1Q96CP7 247 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 ART5Q96L15 291 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 ATP6V1G3Q96LB4 118 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 TMUB1Q9BVT8 246 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 BRINP2Q9C0B6 783 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 DEFB127Q9H1M4 99 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 ACBD3Q9H3P7 528 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 LIN28AQ9H9Z2 209 aaKnown RBP8.04□□□□□ -1.12
COPB1-210ENST00000533533 SLC24A3Q9HC58 644 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 TIMMDC1Q9NPL8 285 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 MIEF1Q9NQG6 463 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 GIMAP4Q9NUV9 329 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 C1orf109Q9NX04 203 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 PLA2G2EQ9NZK7 142 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 UTS2RQ9UKP6 389 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 PPIEQ9UNP9 301 aaKnown RBP8.04□□□□□ -1.12
COPB1-210ENST00000533533 ERVK-19Q9WJR5 959 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 CLDN16Q9Y5I7 305 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 DNAJC15Q9Y5T4 150 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 CSPG4Q6UVK1 2322 aa8.04□□□□□ -1.12
COPB1-210ENST00000533533 FAM221AA4D161 298 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 NPIPA2E9PIF3 369 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 NPIPA3F8WFD2 350 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 HRKO00198 91 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 WWP2O00308 870 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 AKAP10O43572 662 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 LRATO95237 230 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 DHRS4L1P0CG22 281 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 SLC35E2P0CK97 266 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 CPMP14384 443 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 DRD2P14416 443 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 PORP16435 677 aaPredicted RBP8.03□□□□□ -1.12
COPB1-210ENST00000533533 CSNK2A2P19784 350 aaPredicted RBP8.03□□□□□ -1.12
COPB1-210ENST00000533533 ARRB2P32121 409 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 SSR4P51571 173 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 GPR143P51810 404 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 NR0B1P51843 470 aaKnown RBP8.03□□□□□ -1.12
COPB1-210ENST00000533533 IST1P53990 364 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 WDR4P57081 412 aaKnown RBP8.03□□□□□ -1.12
COPB1-210ENST00000533533 PPIAP62937 165 aaKnown RBP8.03□□□□□ -1.12
COPB1-210ENST00000533533 IGLV3-21P80748 117 aaPredicted RBP8.03□□□□□ -1.12
COPB1-210ENST00000533533 BST1Q10588 318 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 MYBPHQ13203 477 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 GXYLT1Q4G148 440 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 ATP6AP1LQ52LC2 224 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 TTMPQ5BVD1 217 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 ATG16L1Q676U5 607 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 PAOXQ6QHF9 649 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 RNF111Q6ZNA4 994 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 C16orf47Q6ZP98 133 aaPredicted RBP8.03□□□□□ -1.12
COPB1-210ENST00000533533 Q6ZSR9 355 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 TRIM42Q8IWZ5 723 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 HOMEZQ8IX15 550 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 GALNT12Q8IXK2 581 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 FNDC5Q8NAU1 212 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 PSD4Q8NDX1 1056 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 ADCY4Q8NFM4 1077 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 OR5M3Q8NGP4 307 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 OR2T11Q8NH01 316 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 CLHC1Q8NHS4 586 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 DYDC1Q8WWB3 177 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 TUBGCP3Q96CW5 907 aa8.03□□□□□ -1.12
COPB1-210ENST00000533533 KCTD12Q96CX2 325 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms