RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 KHDRBS2Q5VWX1 349 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 ACSM2BQ68CK6 577 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 NOXRED1Q6NXP6 359 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 CYP20A1Q6UW02 462 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 LANCL3Q6ZV70 420 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 RPS19BP1Q86WX3 136 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 METTL4Q8N3J2 472 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 LIX1Q8N485 282 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 C1orf52Q8N6N3 182 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 CSNK1A1LQ8N752 337 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 TRPV3Q8NET8 790 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 C16orf52Q8NHV5 167 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 SLC13A3Q8WWT9 602 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 LRRC46Q96FV0 321 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 METTL2AQ96IZ6 378 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 FCRL1Q96LA6 429 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 OR2A5Q96R48 311 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 MACROD1Q9BQ69 325 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 TTYH2Q9BSA4 534 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 MRPL1Q9BYD6 325 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 BRINP2Q9C0B6 783 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 CDCP1Q9H5V8 836 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 TRIM45Q9H8W5 580 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 SYNPO2LQ9H987 977 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 SDR39U1Q9NRG7 319 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 MRGBPQ9NV56 204 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 AHSPQ9NZD4 102 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 BAIAP2L1Q9UHR4 511 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 TAGLN3Q9UI15 199 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 RUVBL1Q9Y265 456 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 DLGAP4Q9Y2H0 992 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 TMED5Q9Y3A6 229 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 SCN2AQ99250 2005 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 A0A0A6YYC8 382 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 LRIT2A6NDA9 550 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 FIGNL2A6NMB9 653 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 RNF212BA8MTL3 300 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 INAFM1C9JVW0 142 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 FAM47E-STBD1D6RA91 191 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 I3L1I5 382 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 SLC22A3O75751 556 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 ATP5HO75947 161 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 COX4I1P13073 169 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 PRDX6P30041 224 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 AVPR1BP47901 424 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 EFNA3P52797 238 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 DCAF7P61962 342 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 RAE1P78406 368 aaKnown RBP10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 FAM53BQ14153 422 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 SYT16Q17RD7 645 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 SPRED3Q2MJR0 410 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 GXYLT1Q4G148 440 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 TMEM35AQ53FP2 167 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 SPIN4Q56A73 249 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 TOR1AIP1Q5JTV8 583 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 VN1R4Q7Z5H5 301 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 UBE3DQ7Z6J8 389 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 ANKRD37Q7Z713 158 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 YTHDF3Q7Z739 585 aaKnown RBP10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 ASPGQ86U10 573 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 FUNDC1Q8IVP5 155 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 SULF2Q8IWU5 870 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 POU5F2Q8N7G0 328 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 RGMAQ96B86 450 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 TM4SF19Q96DZ7 209 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 CMTM5Q96DZ9 223 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 C11orf24Q96F05 449 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 TEX37Q96LM6 180 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 LPAR4Q99677 370 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 BDH2Q9BUT1 245 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 AICDAQ9GZX7 198 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 KLHL31Q9H511 634 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 SIRT5Q9NXA8 310 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 ZIM2Q9NZV7 527 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 CBLCQ9ULV8 474 aa10.47□□□□□ -0.73
TRAPPC4-213ENST00000533149 PHF3Q92576 2039 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 A0A0G2JNJ9 132 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 H7C1Q1 480 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 SYT5O00445 386 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 ANKRD28O15084 1053 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 NDUFS4O43181 175 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 FOXS1O43638 330 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 PDE9AO76083 593 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 SEMA3DO95025 777 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 KLK1P06870 262 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 SDC1P18827 310 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 TACR1P25103 407 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 TPP2P29144 1249 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 IL12AP29459 219 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 UQCRC1P31930 480 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 HNRNPH1P31943 449 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 HLCSP50747 726 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 RAP1GDS1P52306 607 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 CLDN8P56748 225 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 MAT1AQ00266 395 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 ACTN3Q08043 901 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 HYAL2Q12891 473 aa10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 SNTB1Q13884 538 aaKnown RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 CYLC2Q14093 348 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC4-213ENST00000533149 HERC3Q15034 1050 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms