RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 FMO6PO60774 539 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 PRAMEF10O60809 474 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 CTNSO60931 367 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 DBIP07108 87 aaKnown RBP11.52□□□□□ -0.57
CHD7-211ENST00000532149 ALOX5P09917 674 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 ITIH1P19827 911 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 PRKACGP22612 351 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 CBLP22681 906 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 GGT2P36268 569 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 PRKAG1P54619 331 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 HSD17B7P56937 341 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 RPP38P78345 283 aaKnown RBP11.52□□□□□ -0.57
CHD7-211ENST00000532149 CD47Q08722 323 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 ST3GAL3Q11203 375 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 DUSP8Q13202 625 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 ILKQ13418 452 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 RUNX2Q13950 521 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 NR1D2Q14995 579 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 ZNHIT3Q15649 155 aaPredicted RBP11.52□□□□□ -0.57
CHD7-211ENST00000532149 GPAT3Q53EU6 434 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 ZNF628Q5EBL2 1059 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 TCTN3Q6NUS6 607 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 TMEM107Q6UX40 140 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 SZRD1Q7Z422 152 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 SLC44A2Q8IWA5 706 aaPredicted RBP11.52□□□□□ -0.57
CHD7-211ENST00000532149 FAM20CQ8IXL6 584 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 CA13Q8N1Q1 262 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 GALNT15Q8N3T1 639 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 KLHL6Q8WZ60 621 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 HOXB13Q92826 284 aaPredicted RBP11.52□□□□□ -0.57
CHD7-211ENST00000532149 MYDGFQ969H8 173 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 SLC38A4Q969I6 547 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 HSPA12BQ96MM6 686 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 NRTNQ99748 197 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 FNDC11Q9BVV2 318 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 SAP130Q9H0E3 1048 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 RACGAP1Q9H0H5 632 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 TCEAL2Q9H3H9 227 aaPredicted RBP11.52□□□□□ -0.57
CHD7-211ENST00000532149 NMNAT1Q9HAN9 279 aaPredicted RBP11.52□□□□□ -0.57
CHD7-211ENST00000532149 TIMMDC1Q9NPL8 285 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 C14orf105Q9NVL8 296 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 SEMA5BQ9P283 1151 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 C5AR2Q9P296 337 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 CLCA2Q9UQC9 943 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 TESMINQ9Y4I5 508 aa11.52□□□□□ -0.57
CHD7-211ENST00000532149 MAGED1Q9Y5V3 778 aaPredicted RBP11.52□□□□□ -0.57
CHD7-211ENST00000532149 SNRNP200O75643 2136 aaKnown RBP11.51□□□□□ -0.57
CHD7-211ENST00000532149 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 LOC105369274A0A096LPK9 316 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 LOC102723532A0A0G2JNH3 316 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 A0A1B0GTW7 788 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 CCDC160A6NGH7 325 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 C4orf51C9J302 202 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 SLC1A7O00341 560 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 SCAMP1O15126 338 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 PPM1DO15297 605 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 ZNF749O43361 778 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 DYRK3O43781 588 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 B4GALT2O60909 372 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 STX11O75558 287 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 PIAS2O75928 621 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 EIF2S1P05198 315 aaKnown RBP11.51□□□□□ -0.57
CHD7-211ENST00000532149 ALPPL2P10696 532 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 OSMP13725 252 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 GLB1P16278 677 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 HOXD12P35452 270 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 MC3RP41968 323 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 UGT2B15P54855 530 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 PSMD4P55036 377 aaKnown RBP11.51□□□□□ -0.57
CHD7-211ENST00000532149 VSX2P58304 361 aaPredicted RBP11.51□□□□□ -0.57
CHD7-211ENST00000532149 IGLV3-21P80748 117 aaPredicted RBP11.51□□□□□ -0.57
CHD7-211ENST00000532149 TFF2Q03403 129 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 SQSTM1Q13501 440 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 PUM1Q14671 1186 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHD7-211ENST00000532149 MAD2L1BPQ15013 274 aaPredicted RBP11.51□□□□□ -0.57
CHD7-211ENST00000532149 SYPL1Q16563 259 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 EXOC3L2Q2M3D2 409 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 TMEM44Q2T9K0 475 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 ZNF311Q5JNZ3 666 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 TMEM31Q5JXX7 168 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 EXOSC6Q5RKV6 272 aaKnown RBP11.51□□□□□ -0.57
CHD7-211ENST00000532149 FRMPD2BQ6IN97 320 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 LINC00299Q6ZSB3 139 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 KCTD8Q6ZWB6 473 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 PRSS48Q7RTY5 328 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 TRIM73Q86UV7 250 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 OR4N4Q8N0Y3 316 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 SMYD1Q8NB12 490 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 OR9A2Q8NGT5 310 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 C9orf43Q8TAL5 461 aaPredicted RBP11.51□□□□□ -0.57
CHD7-211ENST00000532149 RAB2BQ8WUD1 216 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 RLN3Q8WXF3 142 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 RAB8BQ92930 207 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 CTHRC1Q96CG8 243 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 GIMAP5Q96F15 307 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 RBM18Q96H35 190 aaKnown RBP11.51□□□□□ -0.57
CHD7-211ENST00000532149 AHCYL2Q96HN2 611 aaKnown RBP11.51□□□□□ -0.57
CHD7-211ENST00000532149 DOK1Q99704 481 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 UCK2Q9BZX2 261 aa11.51□□□□□ -0.57
CHD7-211ENST00000532149 YIPF3Q9GZM5 350 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms